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Lsi10G002140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:3501973..3506839
RNA-Seq ExpressionLsi10G002140
SyntenyLsi10G002140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]2.8e-0944.14Show/hide
Query:  RKKGKTELCLQNSSKNTSCMLLFADNSTILKAFSRHFMGILNASDCNDKVCIELDGENLDPKYLLPSITTTIS-KKLLLTDPCISNQNLNDSNSEGRLQI
        ++KGK E  LQ  SK TSCMLLFADN+T L AFS+HFMGIL ASD + KV IE + E+    + LP I       KL +  P    Q  +D  S+ R   
Subjt:  RKKGKTELCLQNSSKNTSCMLLFADNSTILKAFSRHFMGILNASDCNDKVCIELDGENLDPKYLLPSITTTIS-KKLLLTDPCISNQNLNDSNSEGRLQI

Query:  TWKLAELSNLR
           +++L+  R
Subjt:  TWKLAELSNLR
TrEMBL top hitse value%identityAlignment
A0A0A0LQS5 Uncharacterized protein4.0e-0961.29Show/hide
Query:  RKKGKTELCLQNSSKNTSCMLLFADNSTILKAFSRHFMGILNASDCNDKVCIELDGENLDPK
        ++KGK E  LQ  SK TSCMLLFADN+T L AFS+HFMGIL ASD + KV IE + E+   K
Subjt:  RKKGKTELCLQNSSKNTSCMLLFADNSTILKAFSRHFMGILNASDCNDKVCIELDGENLDPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGATATAGGACATCAGTTGATTCACAACCTCTATTTCTATCACTGCAACCGAACTGTGTTCCTGAACTGTTTGAAATTTGGAGGAAGGAAAAAAGGAAAAAC
AGAATTGTGTCTTCAAAATAGTAGCAAGAATACTTCTTGCATGCTCCTCTTTGCTGACAATTCAACGATATTGAAGGCATTTTCAAGGCATTTCATGGGCATTTTAAATG
CTTCAGACTGCAATGACAAAGTTTGCATCGAGTTGGATGGAGAAAATCTGGATCCAAAGTACTTACTGCCTAGCATCACCACCACCATCAGCAAGAAGCTACTTCTGACA
GATCCGTGCATCTCAAATCAGAACTTAAACGATAGCAACTCAGAAGGGAGACTGCAAATTACCTGGAAACTTGCTGAGTTATCAAACTTGCGAAGTAAAGCTCGACATGG
AGGACATCATCAAAGTAGCTGTGCTTTCTATGTAGTCTATTTATTTTTTGTCTTCTGGATGGTGAGACCTCCAGAGGTGTTAACACTGGGAGGTCAAACTAAAACAGCTT
CAATATGTACCTTCCTTCAAGGAGCCAACACCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGATATAGGACATCAGTTGATTCACAACCTCTATTTCTATCACTGCAACCGAACTGTGTTCCTGAACTGTTTGAAATTTGGAGGAAGGAAAAAAGGAAAAAC
AGAATTGTGTCTTCAAAATAGTAGCAAGAATACTTCTTGCATGCTCCTCTTTGCTGACAATTCAACGATATTGAAGGCATTTTCAAGGCATTTCATGGGCATTTTAAATG
CTTCAGACTGCAATGACAAAGTTTGCATCGAGTTGGATGGAGAAAATCTGGATCCAAAGTACTTACTGCCTAGCATCACCACCACCATCAGCAAGAAGCTACTTCTGACA
GATCCGTGCATCTCAAATCAGAACTTAAACGATAGCAACTCAGAAGGGAGACTGCAAATTACCTGGAAACTTGCTGAGTTATCAAACTTGCGAAGTAAAGCTCGACATGG
AGGACATCATCAAAGTAGCTGTGCTTTCTATGTAGTCTATTTATTTTTTGTCTTCTGGATGGTGAGACCTCCAGAGGTGTTAACACTGGGAGGTCAAACTAAAACAGCTT
CAATATGTACCTTCCTTCAAGGAGCCAACACCGATTGA
Protein sequenceShow/hide protein sequence
MEEDIGHQLIHNLYFYHCNRTVFLNCLKFGGRKKGKTELCLQNSSKNTSCMLLFADNSTILKAFSRHFMGILNASDCNDKVCIELDGENLDPKYLLPSITTTISKKLLLT
DPCISNQNLNDSNSEGRLQITWKLAELSNLRSKARHGGHHQSSCAFYVVYLFFVFWMVRPPEVLTLGGQTKTASICTFLQGANTD