; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G002190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS5 DRBM domain-containing protein
Genome locationchr10:3545727..3547611
RNA-Seq ExpressionLsi10G002190
SyntenyLsi10G002190
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571211.1 hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia]7.4e-16890.91Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP K+PLHISRKIS LQRFP EE PK  ATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEEPTDSD+DEDDERFS ESVKKRFD+FERKFKRHEELLK+FT+T+NIDDAFKWMSKID+FEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVA+GKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQH +VGPS D M+QSGFEKEKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

KAG7011014.1 rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-16690.94Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP KTPLHISRKIS LQRFP EE PK  ATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+NLKDTG+LNAYEE TDSD+DEDDERFS ESVKKRFD+FERKFKRHEELLK+FT+T+NIDDAFKWMSKID+FEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGA-DDDDEEEFDDMKERDNILLEKLNAIDKKLE
        NRLKVA+GKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQH +VGPS D M+QSGFEKEKQ I G  DDDDEEEFDDMKERD+ILLEKLNAIDKKLE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGA-DDDDEEEFDDMKERDNILLEKLNAIDKKLE

Query:  EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

XP_022943762.1 DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata]1.4e-16690.32Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP KTPLHISR+IS LQRFP EE PK  ATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEE TDSD+DEDDERFS ESVKKRFD+FERKFKRHEELLK+FT+T+NIDDAFKWMSKID+FEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLK+A+GKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQH +VGPS D M+QSGFEKEKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

XP_023512942.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo]1.8e-16690.62Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP KTPLHISRKIS LQRFP EE PK  ATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEE TDSD+DEDDERFS ESVKKRFD+FERKFKRHEELLK+FT+T+NIDDAFKWMSKID+FEQKHF LRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVA+GKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQH +VGPS D M+QSGFEKEKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

XP_038902106.1 uncharacterized protein LOC120088744 [Benincasa hispida]7.1e-17193.55Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP KTPLHIS K SC  RFP EEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQR RAGIDTKDIDDEDGEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTGDLNAYEEPTDSD+DEDDERFSPESVKKRFDDFERKFKRHEELLKNFT TENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQH +VGPS D  +QSGFEKE+QTI  ADDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

TrEMBL top hitse value%identityAlignment
A0A5D3BRU3 Putative 37S ribosomal protein S52.0e-15585.04Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQN  KTPLHISRKISCLQR PI++I KIS TRCYSTA +RVV DLLAEVEKEK+RERE R RAG+DTKDID+ED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKL+K+N + TGDLNAYEEP+DSD+DEDDERFS ESV+KRF +F+RKF+RH+ELLKNFTD +NIDDAFKWMSKIDRFEQKHF+LRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPN+PANYG IQ R+ GPS +  +QS F K+KQTI G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

A0A6J1D5I3 uncharacterized protein LOC1110172221.5e-15887.46Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRC--YSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDY
        MVNKSQAFSWSRL+L+QVV QNPTKTPLHI+R IS L+RFP EEIPK S +    YSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDY
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRC--YSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDY

Query:  MGVGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGE
        MGVGPLIEKLEK+ LKDTGDLNAYEEPTDSD+DEDDERFSPESVK+RFD FERKFKRHEELLK+FT++EN+DDAFKWM+KID+FEQKHF LRPEYRVIGE
Subjt:  MGVGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGE

Query:  LMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKL
        LMNRLKVAEGKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQ  +VG S D ++QSGF KEKQ I GADDDDEEEFDDMKERD+ILLEKLNAIDKKL
Subjt:  LMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKL

Query:  EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

A0A6J1FXC7 DEAD-box ATP-dependent RNA helicase 426.7e-16790.32Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRLLLNQVVHQNP KTPLHISR+IS LQRFP EE PK  ATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEE TDSD+DEDDERFS ESVKKRFD+FERKFKRHEELLK+FT+T+NIDDAFKWMSKID+FEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLK+A+GKEKFILQQKLNRAMR+VEWKEAYDPNNPANYGVIQH +VGPS D M+QSGFEKEKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

A0A6J1G7C4 uncharacterized protein LOC1114514281.1e-16187.68Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAFSWSRL+LNQVV +NP +TP+HISRKIS   RFP EEIPK  A RCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEEP+DSD+DE+DERFS ES+KKR D+FERKFKRHEELLKNFT+T+NI+DAFKWMSKID+FEQKHF LRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVAEGKEKFILQQKLNRAMR+VEWKEAYDPN PANYGVIQH +VGPS D M+QSGFEKEKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

A0A6J1KZ96 uncharacterized protein LOC1114996081.2e-16387.98Show/hide
Query:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG
        MVNKSQAF+WSRL+LNQVV QNP KTP+HISRKIS   RFP EEIPK SA RCYSTASARVVQDLLAEVEKEKQREREQRRRAG+DTKDIDDEDGEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMG

Query:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM
        VGPLIEKLEK+ LKDTG+LNAYEEP+DSD+DE+DERFS ES+KKRFD+F+RKFKRHEELLKNFT+T+NI+DAFKWMSKID+FEQKHFRLRPEYRVIGELM
Subjt:  VGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELM

Query:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE
        NRLKVAEGKEKFILQQKLNRA R+VEWK+AYDPN PANYGVIQH +VGPS D M+QSGFE+EKQ I G DDDDEEEFDDMKERD+ILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKR PLYRK
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64880.1 Ribosomal protein S5 family protein8.9e-10358.27Show/hide
Query:  KSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQR-----------------FPIEEIPKISATRCYSTASA--------RVVQDLLAEVEKEKQRERE
        +++A SW RLLL     +NP  +    SR+IS L                   FP+ + P IS+ R    +S+        RVV++L+AEVEKEKQRERE
Subjt:  KSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQR-----------------FPIEEIPKISATRCYSTASA--------RVVQDLLAEVEKEKQRERE

Query:  QRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSK
        +R+R G+D KDID ED EDY+G+ P IEKL+KQNLKD G+LN  EE +DSD++ D+     E  +K+ D F +KF+RH+ELL+  T +E +D+AF+WM+K
Subjt:  QRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKQNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSK

Query:  IDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGA------DDD
        +D+FE+KHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMR+VEWKEA+DPNNPANYGVI+        D +   G E+E++ +         DDD
Subjt:  IDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGA------DDD

Query:  DEEEFDDMKERDNILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK
        DEEEFDDMKERD+ILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR PLYRK
Subjt:  DEEEFDDMKERDNILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRTPLYRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAATCAGGTCGTTCACCAAAACCCCACTAAAACCCCACTTCATATTTCCCGGAAAATCTCCTGTCT
CCAACGCTTCCCGATTGAGGAAATTCCGAAGATTTCAGCGACGCGGTGTTACTCCACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTCGCTGAGGTGGAGAAGGAGAAGC
AGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTATTGATACCAAGGATATTGACGATGAAGATGGAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAG
CAAAATTTAAAGGACACTGGGGACTTGAACGCCTATGAAGAGCCCACTGATTCTGATAATGATGAAGACGATGAAAGGTTTAGTCCTGAATCCGTCAAAAAGAGGTTTGA
TGATTTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTGAAGAACTTCACTGACACTGAAAACATCGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGC
AAAAACACTTCCGGCTTCGCCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTCGCAGAGGGCAAGGAAAAGTTCATTCTTCAGCAAAAGTTAAATAGG
GCTATGAGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGAGTTATTCAACACAGAAAAGTAGGTCCATCAGCTGATCCCATGGATCAATC
AGGATTTGAAAAAGAGAAGCAAACCATACTAGGGGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATAATATACTACTGGAGAAGCTTAATGCTA
TAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTA
ACTGAGAAGAAGAGAACACCTCTTTATCGAAAAGTATGTTACTCCATCATCTTGTTTGTGCCTTCTACTTTGTCGTCTTCTGTCTTCTTGTGGCAGTTGATAGTTTCCAA
CTAA
mRNA sequenceShow/hide mRNA sequence
TAAACAAAAACCAAATTGAAAGAAAAAAAAAAATCCTCTCTCTTTCTTTCCCTACTCGTATTTCCTTTACCGTGAGTTCTTCCTTCCCATCTTTGCCGCAGCCGCACGCC
CCATCGGCAGCTTCCTTCTCTCCTATCAGTATCTCCATTGCTTCTCAGCGCCAACCCTCCCCATCCATTGTTTCCTATCTTTCTCTCTCTCAGCTGCTGCCGTCGCCAGC
CGCCGGCACGCCACCACACCAACAACGCAATGTCGTTTTTTTGAGAAAAGAATGTGATTGAATTGAATGGTTTATACATTTTATGCATTTGAAACCGTATTGATGTGTGA
TTGAAGTTTATACTCAAAGAAATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAATCAGGTCGTTCACCAAAACCCCACTAAAACCCCACTTCATAT
TTCCCGGAAAATCTCCTGTCTCCAACGCTTCCCGATTGAGGAAATTCCGAAGATTTCAGCGACGCGGTGTTACTCCACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTCG
CTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTATTGATACCAAGGATATTGACGATGAAGATGGAGAGGATTATATGGGTGTTGGGCCA
TTGATAGAGAAGCTCGAGAAGCAAAATTTAAAGGACACTGGGGACTTGAACGCCTATGAAGAGCCCACTGATTCTGATAATGATGAAGACGATGAAAGGTTTAGTCCTGA
ATCCGTCAAAAAGAGGTTTGATGATTTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTGAAGAACTTCACTGACACTGAAAACATCGATGATGCTTTCAAATGGATGA
GTAAAATCGACAGGTTTGAGCAAAAACACTTCCGGCTTCGCCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTCGCAGAGGGCAAGGAAAAGTTCATT
CTTCAGCAAAAGTTAAATAGGGCTATGAGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGAGTTATTCAACACAGAAAAGTAGGTCCATC
AGCTGATCCCATGGATCAATCAGGATTTGAAAAAGAGAAGCAAACCATACTAGGGGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATAATATAC
TACTGGAGAAGCTTAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTT
GCAGAGGAGAGAAATTCTTTAACTGAGAAGAAGAGAACACCTCTTTATCGAAAAGTATGTTACTCCATCATCTTGTTTGTGCCTTCTACTTTGTCGTCTTCTGTCTTCTT
GTGGCAGTTGATAGTTTCCAACTAA
Protein sequenceShow/hide protein sequence
MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPIEEIPKISATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEK
QNLKDTGDLNAYEEPTDSDNDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTDTENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNR
AMRIVEWKEAYDPNNPANYGVIQHRKVGPSADPMDQSGFEKEKQTILGADDDDEEEFDDMKERDNILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSL
TEKKRTPLYRKVCYSIILFVPSTLSSSVFLWQLIVSN