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Lsi10G002260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationchr10:3672968..3680514
RNA-Seq ExpressionLsi10G002260
SyntenyLsi10G002260
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462784.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo]1.1e-4995.15Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSSTRNLSLV+NQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]6.7e-5096.12Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSS R+LSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]8.7e-5096.12Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSS R+LSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]2.3e-5097.09Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSS R+LSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]3.0e-5096.12Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSS RNLSLV+NQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein1.4e-4893.2Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSSTRNLSLV+NQIG+HTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.5e-5095.15Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSSTRNLSLV+NQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.6e-4992.23Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSS RNLSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial3.2e-5096.12Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSS R+LSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial4.2e-5096.12Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSS R+LSLVSNQIG+HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
SwissProt top hitse value%identityAlignment
Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial8.5e-4071.17Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQ--------IGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQ--------IGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH
Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related6.0e-4171.17Show/hide
Query:  MASSLFKALVESSSKIPSSTRNLSLVSNQ--------IGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSTRNLSLVSNQ--------IGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGACTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCGGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCTATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGCGAGGGAGACAGCAATCCTGCCCTTG
GGCATCCAATCGAGTTCATATGCCTTGACCGGGAGGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGATCATCACCACTAG
mRNA sequenceShow/hide mRNA sequence
GCCAACCCAATTAGAAATTATAGTATTTTAACCTTATTTATTTCTGGGGAAAAAAGTTCCATCCAGAGTTTTTACTTTAAGCTCCCCCTCACCGTAGCACTTCTTCGCGC
TCTCTCTCTCTCTCATCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGACTAGAAA
TCTGAGTCTTGTTAGCAATCAAATCGGCCGGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCTATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCG
AAGGCCGTATCGTTGCTTGCGAGGGAGACAGCAATCCTGCCCTTGGGCATCCAATCGAGTTCATATGCCTTGACCGGGAGGAGCCCGCTGTGTGCAAGTACTGTGGCCTG
CGCTATACTCAGGATCATCACCACTAGAAAATCTGCAAGTGATCATTCCAGCCGGCAACCCTGAACTTGGAAAGACATTACCCTACCTTTCCAAACTTGACTTCTGTAAT
GCAATGACTGTAATGGTTGTACTCTTGCCTGCATAAATAGGAATTTGTGAATTCCATTCACTCGCACTTTGGCCAGGTCCATTGTCTTTGCCAAATTTATTTCATTGTTG
TCTAATGACCCTATCTTGTTGACTCTAATACCAATAAAAGGTTTTTGATCTCTTGGGAGTTGCAAGCTTGAAATTA
Protein sequenceShow/hide protein sequence
MASSLFKALVESSSKIPSSTRNLSLVSNQIGRHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH