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Lsi10G002300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationchr10:3729216..3729494
RNA-Seq ExpressionLsi10G002300
SyntenyLsi10G002300
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR002182 - NB-ARC
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042414.1 disease resistance protein RGA2-like [Cucumis melo var. makuwa]6.9e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

TYK06492.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa]6.9e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

XP_008459150.1 PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]6.9e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

XP_008462780.1 PREDICTED: disease resistance protein RGA2-like [Cucumis melo]6.9e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

XP_011650071.2 disease resistance protein RGA2 [Cucumis sativus]6.9e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

TrEMBL top hitse value%identityAlignment
A0A1S3C9H9 putative disease resistance protein RGA33.3e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

A0A1S3CHQ5 disease resistance protein RGA2-like3.3e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

A0A5A7TG70 Disease resistance protein RGA2-like3.3e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

A0A5D3C5G4 Putative disease resistance protein RGA33.3e-1486.36Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV NHE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

Q6E436 FOM-21.3e-1384.09Show/hide
Query:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI
        TSILPIVGMGGLGKTT+AKLV +HE++++HFDKTVWVCVSEPFI
Subjt:  TSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFI

SwissProt top hitse value%identityAlignment
Q7XA40 Putative disease resistance protein RGA35.3e-0960.98Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPF
        +LPI+GMGGLGKTT+A++V N + I EHF+  +WVCVS+ F
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPF

Q7XBQ9 Disease resistance protein RGA21.4e-0959.52Show/hide
Query:  SILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPF
        S+LPI+GMGGLGKTT+A++V N + + EHF   +W+CVSE F
Subjt:  SILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPF

Q8W3K3 Putative disease resistance protein At1g584003.1e-0952.73Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT
        I+ + GMGGLGKTT+A+ V NHE +K  FD+  WVCVS+ F R+   Q   +NLT
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT

Q8W474 Probable disease resistance protein At1g583903.1e-0952.73Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT
        ++ I GMGGLGKTT+A+ V NHE +K  FD+  WVCVS+ F R+   Q   +NLT
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT

Q9FJB5 Disease resistance RPP8-like protein 34.1e-0942.11Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH
        ++ I GMGG+GKTT+A+ + +H++++ HFD   WVCVS+ F ++  + R L + R H
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH

Arabidopsis top hitse value%identityAlignment
AT1G58390.1 Disease resistance protein (CC-NBS-LRR class) family2.2e-1052.73Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT
        ++ I GMGGLGKTT+A+ V NHE +K  FD+  WVCVS+ F R+   Q   +NLT
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT

AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family2.2e-1052.73Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT
        I+ + GMGGLGKTT+A+ V NHE +K  FD+  WVCVS+ F R+   Q   +NLT
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQ---QDFARNLT

AT5G35450.1 Disease resistance protein (CC-NBS-LRR class) family2.9e-1042.11Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH
        ++ I GMGG+GKTT+A+ + +H++++ HFD   WVCVS+ F ++  + R L + R H
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH

AT5G43470.1 Disease resistance protein (CC-NBS-LRR class) family3.8e-1042.11Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH
        ++ I GMGG+GKTT+A+ V +H++++ HFD   WVCVS+ F ++  + R L + + H
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH

AT5G43470.2 Disease resistance protein (CC-NBS-LRR class) family3.8e-1042.11Show/hide
Query:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH
        ++ I GMGG+GKTT+A+ V +H++++ HFD   WVCVS+ F ++  + R L + + H
Subjt:  ILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTTTGCTGTGGAGGAAACGTTGAAGAAGGTGTTGAAGGTTGCAGCTCAGCAAATTGGTCTCGCATGGGGTTTTCAGGAACATCTATCTTGCCCATTGTTGGTAT
GGGTGGATTGGGGAAAACAACTGTGGCCAAGTTAGTTATCAATCATGAGATGATCAAAGAACATTTTGATAAGACTGTATGGGTATGCGTGTCTGAACCTTTTATACGTC
AACAAGATTTTGCGAGAAATCTTACAAAATCTAGAAGCCATTTCCAATGGATGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTTTGCTGTGGAGGAAACGTTGAAGAAGGTGTTGAAGGTTGCAGCTCAGCAAATTGGTCTCGCATGGGGTTTTCAGGAACATCTATCTTGCCCATTGTTGGTAT
GGGTGGATTGGGGAAAACAACTGTGGCCAAGTTAGTTATCAATCATGAGATGATCAAAGAACATTTTGATAAGACTGTATGGGTATGCGTGTCTGAACCTTTTATACGTC
AACAAGATTTTGCGAGAAATCTTACAAAATCTAGAAGCCATTTCCAATGGATGGGATAG
Protein sequenceShow/hide protein sequence
MDFCCGGNVEEGVEGCSSANWSRMGFSGTSILPIVGMGGLGKTTVAKLVINHEMIKEHFDKTVWVCVSEPFIRQQDFARNLTKSRSHFQWMG