; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G002440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionACT11D09.5
Genome locationchr10:4053986..4057006
RNA-Seq ExpressionLsi10G002440
SyntenyLsi10G002440
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039292 - Protein SICKLE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAS80151.1 ACT11D09.5 [Cucumis melo]2.5e-15485.63Show/hide
Query:  ERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLPPKFSGLRN
        ERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LPP F GLRN
Subjt:  ERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLPPKFSGLRN

Query:  PEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRANYHSSSPS
        PEMSPSSTHQFHQYSPDQRTFYARG S +GGHG PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA Y SSSP+
Subjt:  PEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRANYHSSSPS

Query:  PGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKKARVSDSSS
        PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DKS GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKKARVSDSSS
Subjt:  PGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKKARVSDSSS

Query:  GRSSS-QPSLAEYLAASFKEAVEDAPS
        GRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  GRSSS-QPSLAEYLAASFKEAVEDAPS

KAA0043023.1 ACT11D09.5 [Cucumis melo var. makuwa]1.2e-15685.07Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPL+ESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMSPSSTHQFHQYSPDQRTFYARG S +GG+G PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
         Y SSSP+PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DK  GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS
        ARVSDSSSGRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS

XP_008442005.1 PREDICTED: uncharacterized protein LOC103486001 [Cucumis melo]6.1e-15383.58Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESS T +GQLAPCT PRFDYYTNPMAAFSTSKKKGKIENQ VSDN+VPY+ NTSS     
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMS +STHQFHQ SPD+R FYARG S +GGHG PGMPRP+ +DQG PHMWRG +RPFVNQ+P+HPP EM+SPSHVS PRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWIS-KFGTK
        NY SSSP+PG+ GSFSPG  SHGHH NMTPSPRFG GRGTGSHGRHSS DKSPGPEQFYN SMLEDPWKVLQPCIWTTI P SNS +P ESWIS KFGTK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWIS-KFGTK

Query:  KARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
        KARVSDSSSGRS+SQPSLAEYLAASFKEA+ED P+
Subjt:  KARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

XP_008459151.1 PREDICTED: uncharacterized protein LOC103498353 [Cucumis melo]3.7e-15885.97Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMSPSSTHQFHQYSPDQRTFYARG S +GGHG PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
         Y SSSP+PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DKS GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS
        ARVSDSSSGRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS

XP_038902109.1 protein SICKLE [Benincasa hispida]1.3e-15586.83Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADVANYVETSLP+HLSNPLVESS T +GQLAPCTAPRFDYYTNPMAAFSTSKK+ KIENQPVSDNYVPY+ NTSSAT+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P  SGLRNPEMSPSSTHQFHQYSPDQRTFYARG SGSGGHG P MPRPFPMDQGA HMW GPRRP VNQFPSHPP  MSSPSHVSG  GNSYTNPTQDR 
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
        N HSSSPSPGYQGSFSPG   HGH  NMTPSPRFGSGRG GSHGRHS  DKS GPEQFYNASMLEDPWKVLQP IWTTIP L+    P +SWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
        ARVS+SSSGRSS QPSLAEYLAASFKEAVEDAP+
Subjt:  ARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

TrEMBL top hitse value%identityAlignment
A0A1S3B5C6 uncharacterized protein LOC1034860013.0e-15383.58Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESS T +GQLAPCT PRFDYYTNPMAAFSTSKKKGKIENQ VSDN+VPY+ NTSS     
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMS +STHQFHQ SPD+R FYARG S +GGHG PGMPRP+ +DQG PHMWRG +RPFVNQ+P+HPP EM+SPSHVS PRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWIS-KFGTK
        NY SSSP+PG+ GSFSPG  SHGHH NMTPSPRFG GRGTGSHGRHSS DKSPGPEQFYN SMLEDPWKVLQPCIWTTI P SNS +P ESWIS KFGTK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWIS-KFGTK

Query:  KARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
        KARVSDSSSGRS+SQPSLAEYLAASFKEA+ED P+
Subjt:  KARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

A0A1S3CA20 uncharacterized protein LOC1034983531.8e-15885.97Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMSPSSTHQFHQYSPDQRTFYARG S +GGHG PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
         Y SSSP+PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DKS GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS
        ARVSDSSSGRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS

A0A5A7TI61 ACT11D09.55.8e-15785.07Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPL+ESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMSPSSTHQFHQYSPDQRTFYARG S +GG+G PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
         Y SSSP+PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DK  GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS
        ARVSDSSSGRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS

A0A5D3C828 ACT11D09.51.8e-15885.97Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLP

Query:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA
        P F GLRNPEMSPSSTHQFHQYSPDQRTFYARG S +GGHG PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA
Subjt:  PKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRA

Query:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK
         Y SSSP+PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DKS GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKK
Subjt:  NYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKK

Query:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS
        ARVSDSSSGRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  ARVSDSSSGRSSS-QPSLAEYLAASFKEAVEDAPS

Q6E437 ACT11D09.51.2e-15485.63Show/hide
Query:  ERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLPPKFSGLRN
        ERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESS T VGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSD +VPY+ NTSS T+LPP F GLRN
Subjt:  ERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLPPKFSGLRN

Query:  PEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRANYHSSSPS
        PEMSPSSTHQFHQYSPDQRTFYARG S +GGHG PGMPRP+ ++QG PHMWRGPRRPFVNQFP+HPP EM+S SHVSGPRGNSYTNPTQDRA Y SSSP+
Subjt:  PEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRANYHSSSPS

Query:  PGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKKARVSDSSS
        PG+ GS SPG  SHGHH NMTPSPRFG GRGTG HGRHS  DKS GPEQFYN SMLEDPWKVLQPCIWTTI   SNSAKP ESWISKFGTKKARVSDSSS
Subjt:  PGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKKARVSDSSS

Query:  GRSSS-QPSLAEYLAASFKEAVEDAPS
        GRSSS QPSLAEYLAASFKEA+EDAP+
Subjt:  GRSSS-QPSLAEYLAASFKEAVEDAPS

SwissProt top hitse value%identityAlignment
Q9SB47 Protein SICKLE3.2e-2735.34Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q       RFDYYT+PMAA+S+ KK    + Q +S       P+   +
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA

Query:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN
        + +PP+F     P + P S    +Q   +   F+A        H  P GM    P  +G P  W    R P VN   S PP  +  P   S    N   N
Subjt:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN

Query:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK
            R +Y+++ P       FS  G  + +    T  P  G GR  G  G ++SF +        PG E+FY+ SM EDPWK L+P +W      S+S+ 
Subjt:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK

Query:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
          ++W+ K    KK+  S+++   SS+Q SLAEYLAAS   A  D  S
Subjt:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

Arabidopsis top hitse value%identityAlignment
AT4G24500.1 hydroxyproline-rich glycoprotein family protein2.2e-2835.34Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q       RFDYYT+PMAA+S+ KK    + Q +S       P+   +
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA

Query:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN
        + +PP+F     P + P S    +Q   +   F+A        H  P GM    P  +G P  W    R P VN   S PP  +  P   S    N   N
Subjt:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN

Query:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK
            R +Y+++ P       FS  G  + +    T  P  G GR  G  G ++SF +        PG E+FY+ SM EDPWK L+P +W      S+S+ 
Subjt:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK

Query:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
          ++W+ K    KK+  S+++   SS+Q SLAEYLAAS   A  D  S
Subjt:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

AT4G24500.2 hydroxyproline-rich glycoprotein family protein2.8e-1831.32Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S                   +   +F T   +G                    +
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA

Query:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN
        + +PP+F     P + P S    +Q   +   F+A        H  P GM    P  +G P  W    R P VN   S PP  +  P   S    N   N
Subjt:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN

Query:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK
            R +Y+++ P       FS  G  + +    T  P  G GR  G  G ++SF +        PG E+FY+ SM EDPWK L+P +W      S+S+ 
Subjt:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK

Query:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
          ++W+ K    KK+  S+++   SS+Q SLAEYLAAS   A  D  S
Subjt:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS

AT4G24500.3 hydroxyproline-rich glycoprotein family protein2.2e-2835.34Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q       RFDYYT+PMAA+S+ KK    + Q +S       P+   +
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSA

Query:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN
        + +PP+F     P + P S    +Q   +   F+A        H  P GM    P  +G P  W    R P VN   S PP  +  P   S    N   N
Subjt:  THLPPKFSGLRNPEMSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRP-GMPRPFPMDQGAPHMWRGP-RRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTN

Query:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK
            R +Y+++ P       FS  G  + +    T  P  G GR  G  G ++SF +        PG E+FY+ SM EDPWK L+P +W      S+S+ 
Subjt:  PTQDRANYHSSSPSPGYQGSFSPGGDSHGHHNNMTPSPRFGSGRGTGSHGRHSSFDK-------SPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAK

Query:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS
          ++W+ K    KK+  S+++   SS+Q SLAEYLAAS   A  D  S
Subjt:  PLESWISK-FGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVEDAPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCTGAAAAACGAAGGGAGAGACTGAGAGCAATGCGAATGGAAGCTGCTCAGGCCGATGTAGCTAATTATGTCGAAACTTCTCTGCCTAATCATCTTTCTAA
TCCATTGGTCGAGTCCTCAACTACCACGGTAGGGCAATTAGCACCATGTACAGCCCCAAGATTTGACTATTACACAAACCCTATGGCTGCATTTTCTACTAGCAAGAAGA
AAGGGAAGATTGAGAATCAGCCTGTGTCTGATAATTACGTTCCTTACTACCCCAATACTTCTTCAGCAACTCATCTTCCACCAAAATTTTCAGGATTGAGAAACCCTGAA
ATGTCTCCCTCTTCTACTCATCAATTCCATCAATATTCACCTGATCAGAGAACGTTCTATGCACGAGGTTTTAGTGGATCTGGTGGCCATGGTAGACCAGGAATGCCCAG
ACCTTTTCCTATGGATCAAGGAGCTCCTCATATGTGGCGTGGACCGAGAAGGCCATTTGTCAACCAGTTCCCTAGCCATCCACCGTGGGAGATGAGCTCCCCCAGCCATG
TCTCTGGACCAAGAGGTAACTCGTACACCAATCCTACTCAAGACAGGGCTAATTACCATAGTTCAAGCCCTAGTCCAGGGTACCAAGGCAGTTTTAGTCCAGGTGGAGAC
AGCCATGGACATCATAACAATATGACCCCTAGTCCAAGATTTGGCTCTGGACGAGGTACTGGTTCTCATGGTCGTCATTCTTCATTTGACAAATCACCTGGACCAGAACA
ATTTTACAATGCCTCCATGCTTGAAGATCCTTGGAAGGTTCTGCAACCTTGTATTTGGACGACAATTCCTCCATTGAGTAATTCTGCAAAACCTTTGGAATCTTGGATTT
CCAAGTTTGGTACAAAGAAAGCAAGAGTTTCAGATTCTTCTTCTGGCAGGTCAAGCTCTCAACCTAGCCTCGCCGAGTACCTGGCTGCCTCTTTCAAGGAAGCAGTCGAG
GATGCACCAAGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCTGAAAAACGAAGGGAGAGACTGAGAGCAATGCGAATGGAAGCTGCTCAGGCCGATGTAGCTAATTATGTCGAAACTTCTCTGCCTAATCATCTTTCTAA
TCCATTGGTCGAGTCCTCAACTACCACGGTAGGGCAATTAGCACCATGTACAGCCCCAAGATTTGACTATTACACAAACCCTATGGCTGCATTTTCTACTAGCAAGAAGA
AAGGGAAGATTGAGAATCAGCCTGTGTCTGATAATTACGTTCCTTACTACCCCAATACTTCTTCAGCAACTCATCTTCCACCAAAATTTTCAGGATTGAGAAACCCTGAA
ATGTCTCCCTCTTCTACTCATCAATTCCATCAATATTCACCTGATCAGAGAACGTTCTATGCACGAGGTTTTAGTGGATCTGGTGGCCATGGTAGACCAGGAATGCCCAG
ACCTTTTCCTATGGATCAAGGAGCTCCTCATATGTGGCGTGGACCGAGAAGGCCATTTGTCAACCAGTTCCCTAGCCATCCACCGTGGGAGATGAGCTCCCCCAGCCATG
TCTCTGGACCAAGAGGTAACTCGTACACCAATCCTACTCAAGACAGGGCTAATTACCATAGTTCAAGCCCTAGTCCAGGGTACCAAGGCAGTTTTAGTCCAGGTGGAGAC
AGCCATGGACATCATAACAATATGACCCCTAGTCCAAGATTTGGCTCTGGACGAGGTACTGGTTCTCATGGTCGTCATTCTTCATTTGACAAATCACCTGGACCAGAACA
ATTTTACAATGCCTCCATGCTTGAAGATCCTTGGAAGGTTCTGCAACCTTGTATTTGGACGACAATTCCTCCATTGAGTAATTCTGCAAAACCTTTGGAATCTTGGATTT
CCAAGTTTGGTACAAAGAAAGCAAGAGTTTCAGATTCTTCTTCTGGCAGGTCAAGCTCTCAACCTAGCCTCGCCGAGTACCTGGCTGCCTCTTTCAAGGAAGCAGTCGAG
GATGCACCAAGTGTGTGAAAGTGACATTTTATCCAGGCATTTCATTTTTACTGTAATACTCAAATTCAGTATTCTCTAAATTCCAGCCTAATTTTCCTCTATAGACTGGT
TTTATGTAGTAAATCTACAGTTAATGGATATATTTTATCAATCTTGTTTAGATTATGTACATAATTTAGCTTCTTCCTTTTAACATTTGTTGTCAAATGCTCTTCTTTGT
TAAGCATTTAATAGGATTGAGTTCCTCATGGTTGAACCACT
Protein sequenceShow/hide protein sequence
MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSTTTVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDNYVPYYPNTSSATHLPPKFSGLRNPE
MSPSSTHQFHQYSPDQRTFYARGFSGSGGHGRPGMPRPFPMDQGAPHMWRGPRRPFVNQFPSHPPWEMSSPSHVSGPRGNSYTNPTQDRANYHSSSPSPGYQGSFSPGGD
SHGHHNNMTPSPRFGSGRGTGSHGRHSSFDKSPGPEQFYNASMLEDPWKVLQPCIWTTIPPLSNSAKPLESWISKFGTKKARVSDSSSGRSSSQPSLAEYLAASFKEAVE
DAPSV