; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G002840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:4549884..4556733
RNA-Seq ExpressionLsi10G002840
SyntenyLsi10G002840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032099.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.2e-1592.86Show/hide
Query:  DSRYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        D RYYELGP+DPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  DSRYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
XP_017432587.1 PREDICTED: uncharacterized protein LOC108339876 [Vigna angularis]6.2e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
XP_023513270.1 uncharacterized protein LOC111777786 [Cucurbita pepo subsp. pepo]6.2e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGP+DPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
XP_027909585.1 uncharacterized protein LOC114168822 isoform X1 [Vigna unguiculata]6.2e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
XP_038900664.1 uncharacterized protein LOC120087822 [Benincasa hispida]4.8e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
TrEMBL top hitse value%identityAlignment
A0A0L9V941 Uncharacterized protein3.0e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
A0A1S3VYF9 uncharacterized protein LOC1067797173.0e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
A0A5A7SSA1 Putative mitochondrial protein3.0e-1592.86Show/hide
Query:  DSRYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        D RYYELGP+DPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  DSRYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
A0A6J1D625 uncharacterized protein LOC1110172573.0e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGPDDPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
A0A6J1JGM5 uncharacterized protein LOC1114843263.0e-1597.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYELGP+DPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein2.5e-1477.5Show/hide
Query:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE
        RYYEL PDDPPYAAKFYDCCGAED  A GC T+ H+SYD+
Subjt:  RYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCAAGCTTAATCACACTAGTGACAACAAGGAGTGGTGGGTATGGAAATCACCACATGATTGAGCTTGCATTGGTTTGGAGTTATAGAGTTGAATTTGATAGAAT
GATGGATGTGAAGTCAGCTGAAGATTCATGTCTGTTGATTGATTCAAGGTACTATGAATTGGGACCCGACGACCCGCCGTATGCTGCCAAATTCTACGACTGTTGTGGGG
CTGAGGACGCCGAGGCGTCAGGCTGCACCACCAGCTTCCATGTTTCTTATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
AGAGAACCATGATTTGTTGAAAACTCATTCTATTTGTCAACCGAAGCTTTCAAAAATAGCAACAGTTTTAGTGCCCAAAACGCTTGAAAATACATCATGACCCCCACTTA
AGGATGCTTGAAACAAACTTTAAATTACATTACCCAAATGATATTTTAACATTATTATTATTATTATTATTTTTTATCTAATTGAAGAAGAACCCCAAAAATCCCATATT
TTCACGCATCAGCATTTCCTTAGGGAAGAAGACGAACGTGTAAATTGAAAGAATCAGTGGAATGGAGAAACAGAGCAAGACTGATAAATGTGAAGAAATGGAGAAGCTTT
GCCGAAGATGTAATCGCTCCTATCTTCCATCCTCCAATTCATCCTCTTCATGCCGTTTCCATCCTTCTTTTTTCGTCTGTCGTCGCCACGATGACCAAAAGAGGTGGGTG
AGTCATGTGAGCTGGTTTTCCCCTAGAGTACCAAGTCAGCAAGGTGCACAAAAATTGGCATGACATGATTGCATGAGTTGCTTCTCATTTCTGTGGTTGAAAGATGTCGC
CAAGCTTAATCACACTAGTGACAACAAGGAGTGGTGGGTATGGAAATCACCACATGATTGAGCTTGCATTGGTTTGGAGTTATAGAGTTGAATTTGATAGAATGATGGAT
GTGAAGTCAGCTGAAGATTCATGTCTGTTGATTGATTCAAGGTACTATGAATTGGGACCCGACGACCCGCCGTATGCTGCCAAATTCTACGACTGTTGTGGGGCTGAGGA
CGCCGAGGCGTCAGGCTGCACCACCAGCTTCCATGTTTCTTATGATGAATGA
Protein sequenceShow/hide protein sequence
MSPSLITLVTTRSGGYGNHHMIELALVWSYRVEFDRMMDVKSAEDSCLLIDSRYYELGPDDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE