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Lsi10G003070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:4932156..4932629
RNA-Seq ExpressionLsi10G003070
SyntenyLsi10G003070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI32450.3 unnamed protein product, partial [Vitis vinifera]4.9e-1261.36Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGG
        + EAREDH +GV+  +RE+GEG++GFELVDDGGE+ + EAVE +PLGV++RGF GP+V+GGE  EGG+GVV  G R     GG GGGG
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGG

KAF5448691.1 hypothetical protein F2P56_029198 [Juglans regia]2.1e-1860.61Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSGG--GGVGARG
        M E+ EDH + +IGRKREIGE ++G ELV+DGGEDRV E VEG PLGVA+RG EGP+V  GE A+G +G +GG G   G  GG  G  + G  GG GARG
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSGG--GGVGARG

Query:  GDEGEDGGDGEEKERGG-GGGGEKGGGRVEGGG---GRGGGGGRSG----GEEGNGGIEVIVEME
        G EGEDG DGEE+ERGG GGGGE+ G    GGG   G GGGGG SG    GEEG+GG+E I+E+E
Subjt:  GDEGEDGGDGEEKERGG-GGGGEKGGGRVEGGG---GRGGGGGRSG----GEEGNGGIEVIVEME

PON35851.1 hypothetical protein PanWU01x14_332970 [Parasponia andersonii]4.5e-2167.35Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA
        M E  +DH +GVIGR+REIGE ++G +L+DDGGEDRV EAV GAPLGV +R  EGP+V+GGEG+EGG+GVVGG G   G  GGGGG    GG GGGG G 
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA

Query:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE
         GGD GEDGGDGEE+ERGGGG G E+G G   GGGGRGGGGG  GGE
Subjt:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE

POO03082.1 hypothetical protein TorRG33x02_011430 [Trema orientale]4.5e-2167.35Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA
        M E  +DH +GVIGR+REIGE ++G +L+DDGGEDRV EAV GAPLGV +RG EGP+V+GGEG+EGG+GVVGG G   G  GGGGG    GG GGGG G 
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA

Query:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE
         GGD GEDGGDGEE+ERG GG G E+G G   GGGGRGGGGG  GGE
Subjt:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE

TYK13567.1 hypothetical protein E5676_scaffold299G00470 [Cucumis melo var. makuwa]5.8e-2174.78Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSG-----GGGVG
        MAEAREDHSNGVI R+REIGEGNMGFELVDDGGEDRV E VEGAPLG+AKRGFEGPNVVGGEGAEGG+GVVGGGG R GSG G GG   G        VG
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSG-----GGGVG

Query:  ARGGDEGEDGGDGEE
         +  D+G + GDGEE
Subjt:  ARGGDEGEDGGDGEE

TrEMBL top hitse value%identityAlignment
A0A2P5AH47 Uncharacterized protein2.2e-2167.35Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA
        M E  +DH +GVIGR+REIGE ++G +L+DDGGEDRV EAV GAPLGV +R  EGP+V+GGEG+EGG+GVVGG G   G  GGGGG    GG GGGG G 
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA

Query:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE
         GGD GEDGGDGEE+ERGGGG G E+G G   GGGGRGGGGG  GGE
Subjt:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE

A0A2P5FZ69 Uncharacterized protein2.2e-2167.35Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA
        M E  +DH +GVIGR+REIGE ++G +L+DDGGEDRV EAV GAPLGV +RG EGP+V+GGEG+EGG+GVVGG G   G  GGGGG    GG GGGG G 
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGG----GGSGGGGVGA

Query:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE
         GGD GEDGGDGEE+ERG GG G E+G G   GGGGRGGGGG  GGE
Subjt:  RGGDEGEDGGDGEEKERGGGG-GGEKGGGRVEGGGGRGGGGGRSGGE

A0A5D3CNV7 Uncharacterized protein2.8e-2174.78Show/hide
Query:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSG-----GGGVG
        MAEAREDHSNGVI R+REIGEGNMGFELVDDGGEDRV E VEGAPLG+AKRGFEGPNVVGGEGAEGG+GVVGGGG R GSG G GG   G        VG
Subjt:  MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSG-----GGGVG

Query:  ARGGDEGEDGGDGEE
         +  D+G + GDGEE
Subjt:  ARGGDEGEDGGDGEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGGCGAGAGAGGACCATAGCAACGGCGTAATCGGAAGGAAGAGAGAGATTGGAGAGGGCAATATGGGGTTTGAGCTTGTCGACGATGGTGGTGAAGACAGGGT
GAGAGAGGCCGTAGAGGGAGCGCCATTGGGCGTCGCGAAGAGGGGCTTCGAGGGACCAAATGTGGTCGGTGGAGAAGGCGCGGAAGGCGGAAACGGAGTAGTCGGAGGAG
GAGGAAGGAGGAGGGGGAGTGGCGGCGGTGGTGGAGGTGGGGGAAGTGGAGGAGGAGGGGTTGGGGCGAGAGGAGGCGATGAAGGAGAGGACGGAGGCGATGGTGAAGAA
AAGGAGAGGGGCGGCGGAGGAGGAGGAGAGAAGGGAGGTGGGAGAGTTGAGGGAGGCGGAGGAAGGGGAGGAGGCGGAGGAAGGAGTGGAGGGGAGGAGGGAAATGGTGG
GATCGAGGTAATTGTGGAGATGGAGGAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGGCGAGAGAGGACCATAGCAACGGCGTAATCGGAAGGAAGAGAGAGATTGGAGAGGGCAATATGGGGTTTGAGCTTGTCGACGATGGTGGTGAAGACAGGGT
GAGAGAGGCCGTAGAGGGAGCGCCATTGGGCGTCGCGAAGAGGGGCTTCGAGGGACCAAATGTGGTCGGTGGAGAAGGCGCGGAAGGCGGAAACGGAGTAGTCGGAGGAG
GAGGAAGGAGGAGGGGGAGTGGCGGCGGTGGTGGAGGTGGGGGAAGTGGAGGAGGAGGGGTTGGGGCGAGAGGAGGCGATGAAGGAGAGGACGGAGGCGATGGTGAAGAA
AAGGAGAGGGGCGGCGGAGGAGGAGGAGAGAAGGGAGGTGGGAGAGTTGAGGGAGGCGGAGGAAGGGGAGGAGGCGGAGGAAGGAGTGGAGGGGAGGAGGGAAATGGTGG
GATCGAGGTAATTGTGGAGATGGAGGAGAGTTGA
Protein sequenceShow/hide protein sequence
MAEAREDHSNGVIGRKREIGEGNMGFELVDDGGEDRVREAVEGAPLGVAKRGFEGPNVVGGEGAEGGNGVVGGGGRRRGSGGGGGGGGSGGGGVGARGGDEGEDGGDGEE
KERGGGGGGEKGGGRVEGGGGRGGGGGRSGGEEGNGGIEVIVEMEES