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Lsi10G003080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhytocyanin domain-containing protein
Genome locationchr10:4934157..4936890
RNA-Seq ExpressionLsi10G003080
SyntenyLsi10G003080
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR008972 - Cupredoxin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13568.1 extensin [Cucumis melo var. makuwa]9.8e-3790.12Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPHSVY LPNMRSFANCDLGKAKM+AN+ QGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFT+ PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

XP_008459215.1 PREDICTED: extensin, partial [Cucumis melo]9.8e-3790.12Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPHSVY LPNMRSFANCDLGKAKM+AN+ QGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFT+ PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

XP_011649199.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.1e-3587.65Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPH+VY LPNMRS ANCD GKAK++AN+TQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTL PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

XP_023512234.1 uncharacterized protein LOC111777023 [Cucurbita pepo subsp. pepo]1.3e-3370.16Show/hide
Query:  TATNTTTIPTNTTTTVIAIVAATAIVIATITTTEPTKSKKDHMFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGD-GFEFVLKDQNPY
        T TN TTIPT  T T             TITTT PT S KDH+FKYDPPN++TP HSVYQLPNMRSF NCDLGKAKM+AN TQGS + GFEF LK QNPY
Subjt:  TATNTTTIPTNTTTTVIAIVAATAIVIATITTTEPTKSKKDHMFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGD-GFEFVLKDQNPY

Query:  YFACGEGNGFHCKLGSMKFTLIPI
        YFACGE NGFHC+ GSMKFTL PI
Subjt:  YFACGEGNGFHCKLGSMKFTLIPI

XP_038902031.1 extensin-3-like [Benincasa hispida]4.0e-3893.83Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPNTSTPPHSVYQLPNMRSFANCDLGK KMVAN+TQGS DGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTL PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

TrEMBL top hitse value%identityAlignment
A0A0A0LIT9 Phytocyanin domain-containing protein5.3e-3687.65Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPH+VY LPNMRS ANCD GKAK++AN+TQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTL PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

A0A1S3CAV5 extensin4.8e-3790.12Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPHSVY LPNMRSFANCDLGKAKM+AN+ QGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFT+ PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

A0A5D3CQT7 Extensin4.8e-3790.12Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN STPPHSVY LPNMRSFANCDLGKAKM+AN+ QGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFT+ PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

A0A6J1FUQ3 alpha carbonic anhydrase 8-like8.7e-3180.49Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGD-GFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKYDPPN++TP HSVYQLPNMRSF NCDLGKAKM+AN TQGS + GFEF LK QNPYYFACGE NGFHC+ GSMKFTL PI
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGD-GFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

A0A6J1G5T9 extensin-like isoform X48.1e-2972.29Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPIKR
        +FKYDPPN+STPPH+VY LPNM+S   CD  +AK+VANLTQGSG+GF FVLK Q  YYFACGEGNGFHC LGSMKF++ P  R
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPIKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15770.1 Cupredoxin superfamily protein4.0e-1235.42Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPIKRVRLKLVRVTFVEF
        +FKYD   ++   ++VY   +  S+ NCD+  A+ + +  +GS + F F LK   PY+FA GE +G +C+  +MKFT+ P+  V +K   V  + F
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPIKRVRLKLVRVTFVEF

AT2G15780.1 Cupredoxin superfamily protein3.6e-2155.56Show/hide
Query:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +FKY+PP   T  HSVY LPN  S+  CD+ K KM+A+  QG+G GFEFVLK   PYY +CGE +G HC  G+MKFT++P+
Subjt:  MFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI

AT4G34300.1 Cupredoxin superfamily protein2.8e-0528.28Show/hide
Query:  IVIATITTTEPTKSKKDHMFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI
        +++ T    + T+SK  H       +     + VY LP+M+SF  C++ + K +      S  GF+ +L+  + YYF  G+ N  +    +MKF++ PI
Subjt:  IVIATITTTEPTKSKKDHMFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACACAATCGGCCTCCACCACCACCATTACGACGTCCTCGAACCCCGCCATCACATCGGTTTCCACCTGCACCATCACGACATCCTCGAACACCACCATCGCCCC
GGTTTCCACCACCATCAAGACATCCTCGAACGCCACCATCACCTCGGTTGTCACCACCACCACCATCACGACGTCCTCGAACGCCACCACCACAATGGATACCATCGCCA
CCACCACCATCACCAGTGCTGTCATCGCCTCCACCACCATCACGAAGGCCTCGAACACCACCACCACAAAAGTTGCCACCACCGTCACAACCCGAGACACCGCCGCCATC
ACCGATGGTGTCACCACCACCACCACCACGATCACGACGGCCACGAACACCACCACCATCCCAACAAATACCACTACCACCGTCATCGCCATCGTTGCCGCCACCGCCAT
CGTCATCGCCACCATCACCACTACCGAGCCCACAAAGTCCAAGAAAGATCATATGTTCAAATACGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTAC
CAAACATGAGAAGCTTTGCTAATTGTGATTTGGGAAAGGCCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGGTTTGAGTTTGTGCTCAAAGACCAAAATCCT
TACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAACTTGGATCCATGAAGTTCACCCTCATACCAATAAAACGAGTTAGGTTAAAACTGGTTAGGGTTACGTT
TGTAGAGTTCAAAACAAGTTGTCATAGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACACAATCGGCCTCCACCACCACCATTACGACGTCCTCGAACCCCGCCATCACATCGGTTTCCACCTGCACCATCACGACATCCTCGAACACCACCATCGCCCC
GGTTTCCACCACCATCAAGACATCCTCGAACGCCACCATCACCTCGGTTGTCACCACCACCACCATCACGACGTCCTCGAACGCCACCACCACAATGGATACCATCGCCA
CCACCACCATCACCAGTGCTGTCATCGCCTCCACCACCATCACGAAGGCCTCGAACACCACCACCACAAAAGTTGCCACCACCGTCACAACCCGAGACACCGCCGCCATC
ACCGATGGTGTCACCACCACCACCACCACGATCACGACGGCCACGAACACCACCACCATCCCAACAAATACCACTACCACCGTCATCGCCATCGTTGCCGCCACCGCCAT
CGTCATCGCCACCATCACCACTACCGAGCCCACAAAGTCCAAGAAAGATCATATGTTCAAATACGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTAC
CAAACATGAGAAGCTTTGCTAATTGTGATTTGGGAAAGGCCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGGTTTGAGTTTGTGCTCAAAGACCAAAATCCT
TACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAACTTGGATCCATGAAGTTCACCCTCATACCAATAAAACGAGTTAGGTTAAAACTGGTTAGGGTTACGTT
TGTAGAGTTCAAAACAAGTTGTCATAGCTTTTGA
Protein sequenceShow/hide protein sequence
MKTQSASTTTITTSSNPAITSVSTCTITTSSNTTIAPVSTTIKTSSNATITSVVTTTTITTSSNATTTMDTIATTTITSAVIASTTITKASNTTTTKVATTVTTRDTAAI
TDGVTTTTTTITTATNTTTIPTNTTTTVIAIVAATAIVIATITTTEPTKSKKDHMFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKAKMVANLTQGSGDGFEFVLKDQNP
YYFACGEGNGFHCKLGSMKFTLIPIKRVRLKLVRVTFVEFKTSCHSF