CuGenDBv2

Gene ID	Lsi10G003190
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	CCG-binding protein 1
Genome location	chr10:5135357..5136557
RNA-Seq Expression	Lsi10G003190
Synteny	Lsi10G003190
Gene Ontology terms	GO:0010183 - pollen tube guidance (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0036033 - mediator complex binding (molecular function)
InterPro domains	IPR037502 - CCG-binding protein 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004153261.1 CCG-binding protein 1 [Cucumis sativus]

8.3e-89

84.69

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Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        M+SSLL S+SSPLLL       RRIGS SS  FSS+++VR SSKSH+YIPKL+PFSR+KLDRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKG-LKEVEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY
        DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQ+ KGKEKE RK   KEVEGRG ++CPIPDGLPKSAEEIEEEEEGRMPDS FTRLLRSKGTFPAWY
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKG-LKEVEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY

Query:  SPAPDHETD
        SPAPDHETD
Subjt:  SPAPDHETD

XP_008459226.1 PREDICTED: CCG-binding protein 1 [Cucumis melo]

1.9e-88

85.17

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Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        MESSLL S+SSPLLL       RRIGS  S RFSST++VR SSKSH+YIPKLEPFSR+KLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY
        DLEKE+PKQEVEKLILQAGGVKSLIGC+HGITAI + KGKEKE RK  K  VEGRG K+CPIPDGLPKSAEEIEEEE GRMPDS FTRLLRSKGTFPAWY
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY

Query:  SPAPDHETD
        SPAPDHETD
Subjt:  SPAPDHETD

XP_022943281.1 CCG-binding protein 1 [Cucurbita moschata]

6.6e-86

83.01

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Query:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD
        MESSLL S SSPLLL      RRIGS SSPRF STV VRCSS+SHA IPKLEPFSRTKLDRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKD
Subjt:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD

Query:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA
        LEKESPKQEVEKLILQAGGVKSLIG +HGI  I +RK  E EA+K L  VE R +DCPIPDGLPKSAEEIEEEE  RMPDSPFTRLLRSKGTFPAWY+PA
Subjt:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA

Query:  PDHETD
        PDHETD
Subjt:  PDHETD

XP_023512041.1 CCG-binding protein 1 [Cucurbita pepo subsp. pepo]

3.9e-86

83.5

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Query:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD
        MESSLL SVSSPLLL      RRIGS SSPRF STV VRCSS+SHA IPKLEPFSRTKLDRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKD
Subjt:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD

Query:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA
        LEKESPKQEVEKLILQAGGVKSLIG +HGI  I +RK  E EA+K L  VE R +DCPIPDGLPKSAEEIEEEE  RMPDSPFTRLLRSKGTFPAWY+PA
Subjt:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA

Query:  PDHETD
        PDHETD
Subjt:  PDHETD

XP_038877912.1 CCG-binding protein 1 [Benincasa hispida]

2.0e-95

89.86

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Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        MESS+L SVSSPLLL       RRIG SSSPRFSSTV VRCSSK+HAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSP
        DLEKESPKQEVEKLILQAGGVKSLIGC+HGITAIQ+RKGKEKE RK  K VEGRG++CPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKG FPAWYSP
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSP

Query:  APDHETD
        APDHETD
Subjt:  APDHETD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIJ6 Uncharacterized protein

4.0e-89

84.69

Show/hide

Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        M+SSLL S+SSPLLL       RRIGS SS  FSS+++VR SSKSH+YIPKL+PFSR+KLDRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKG-LKEVEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY
        DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQ+ KGKEKE RK   KEVEGRG ++CPIPDGLPKSAEEIEEEEEGRMPDS FTRLLRSKGTFPAWY
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKG-LKEVEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY

Query:  SPAPDHETD
        SPAPDHETD
Subjt:  SPAPDHETD

A0A1S3C971 CCG-binding protein 1

9.0e-89

85.17

Show/hide

Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        MESSLL S+SSPLLL       RRIGS  S RFSST++VR SSKSH+YIPKLEPFSR+KLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY
        DLEKE+PKQEVEKLILQAGGVKSLIGC+HGITAI + KGKEKE RK  K  VEGRG K+CPIPDGLPKSAEEIEEEE GRMPDS FTRLLRSKGTFPAWY
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY

Query:  SPAPDHETD
        SPAPDHETD
Subjt:  SPAPDHETD

A0A5A7TT03 CCG-binding protein 1

9.0e-89

85.17

Show/hide

Query:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
        MESSLL S+SSPLLL       RRIGS  S RFSST++VR SSKSH+YIPKLEPFSR+KLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESSLLPSVSSPLLLH------RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY
        DLEKE+PKQEVEKLILQAGGVKSLIGC+HGITAI + KGKEKE RK  K  VEGRG K+CPIPDGLPKSAEEIEEEE GRMPDS FTRLLRSKGTFPAWY
Subjt:  DLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKE-VEGRG-KDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWY

Query:  SPAPDHETD
        SPAPDHETD
Subjt:  SPAPDHETD

A0A6J1FRB4 CCG-binding protein 1

3.2e-86

83.01

Show/hide

Query:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD
        MESSLL S SSPLLL      RRIGS SSPRF STV VRCSS+SHA IPKLEPFSRTKLDRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKD
Subjt:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD

Query:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA
        LEKESPKQEVEKLILQAGGVKSLIG +HGI  I +RK  E EA+K L  VE R +DCPIPDGLPKSAEEIEEEE  RMPDSPFTRLLRSKGTFPAWY+PA
Subjt:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA

Query:  PDHETD
        PDHETD
Subjt:  PDHETD

A0A6J1JH09 CCG-binding protein 1

1.6e-85

82.04

Show/hide

Query:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD
        MESS L SVSSPLLL      RRIGS+SSPRF STV VRCSS+SHA IPKL+PFSRTKLDRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKD
Subjt:  MESSLLPSVSSPLLLH-----RRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKD

Query:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA
        LEKESPKQEVEKLILQAGGVKSLIG +HGI  I ++K  E EA+K L  VE R +DCPIPDGLPKSAEEIEEEE  RMPDSPFTRLLRSKGTFPAWY+PA
Subjt:  LEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPA

Query:  PDHETD
        PDHETD
Subjt:  PDHETD

SwissProt top hits

e value

%identity

Alignment

Q9XIM0 CCG-binding protein 1

4.3e-56

63.07

Show/hide

Query:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR
        +VRCSS     +PKLE FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+AYFELKDLE+E PK EVE LILQ GG+KSLIGC+HG+ +++  
Subjt:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR

Query:  KGKEKEARKGLKEVE------GRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD
          K+ + + GL   E      G      IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  KGKEKEARKGLKEVE------GRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Arabidopsis top hits

e value

%identity

Alignment

AT2G15890.1 maternal effect embryo arrest 14

3.1e-57

63.07

Show/hide

Query:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR
        +VRCSS     +PKLE FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+AYFELKDLE+E PK EVE LILQ GG+KSLIGC+HG+ +++  
Subjt:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR

Query:  KGKEKEARKGLKEVE------GRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD
          K+ + + GL   E      G      IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  KGKEKEARKGLKEVE------GRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

AT2G15890.2 maternal effect embryo arrest 14

5.8e-48

58.82

Show/hide

Query:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR
        +VRCSS     +PKLE FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+AYFELKDLE+E PK EVE LILQ                    
Subjt:  LVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQQR

Query:  KGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD
         G+E +  KG+           IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  KGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATCCTCCCTTCTCCCTTCCGTTTCATCTCCCTTACTTCTTCATCGCCGGATCGGATCCTCTTCCTCTCCGAGATTCTCTTCTACCGTTCTTGTTCGTTGTTCTTC
CAAAAGCCATGCTTATATCCCGAAGCTCGAGCCATTTAGTCGCACGAAGCTCGATCGCGCCATCAAAGAACCGCCTCTGATTGAGAAATCCGAGAACGAGCTTGCAGATT
ATTGCTCAACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAACTGAAAGATCTGGAAAAAGAATCACCAAAACAAGAAGTGGAGAAACTGATTCTT
CAAGCAGGAGGCGTGAAATCGCTGATCGGATGCGTACATGGGATCACGGCCATACAGCAGAGGAAGGGAAAGGAAAAGGAGGCGAGGAAGGGATTGAAGGAGGTGGAAGG
AAGAGGGAAGGATTGTCCAATACCAGATGGATTGCCGAAATCTGCAGAAGAAATAGAAGAAGAAGAGGAAGGGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAA
GCAAGGGTACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGA

mRNA sequence

Show/hide mRNA sequence

ATCCCATCCTTATCCAGTTTTTGTTCTCAGCAGCTTCTTCCTCAACAATTGCTCTCAATTTTGTACACCAAAGTTCCGATTTCCGTTTGAATTTAACGATGGAATCCTCC
CTTCTCCCTTCCGTTTCATCTCCCTTACTTCTTCATCGCCGGATCGGATCCTCTTCCTCTCCGAGATTCTCTTCTACCGTTCTTGTTCGTTGTTCTTCCAAAAGCCATGC
TTATATCCCGAAGCTCGAGCCATTTAGTCGCACGAAGCTCGATCGCGCCATCAAAGAACCGCCTCTGATTGAGAAATCCGAGAACGAGCTTGCAGATTATTGCTCAACGT
TGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAACTGAAAGATCTGGAAAAAGAATCACCAAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGC
GTGAAATCGCTGATCGGATGCGTACATGGGATCACGGCCATACAGCAGAGGAAGGGAAAGGAAAAGGAGGCGAGGAAGGGATTGAAGGAGGTGGAAGGAAGAGGGAAGGA
TTGTCCAATACCAGATGGATTGCCGAAATCTGCAGAAGAAATAGAAGAAGAAGAGGAAGGGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAAGCAAGGGTACAT
TCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGAAACTGAAAATTTCTTGGTTTTAGGGTTTTTTTTAGCAGATTGAATAGCGAAGTTGATTGATGAATG
GCTGTGTAAATATTTGTTATATAAAGTTAGTGATTAGGGGATAGCCTTTTGTGTATATGTATTTTGATGTGTGTTTTGGTATTATTATATATTATTAAATCGCATATTGA
CCCAAAAGCTTGAGGTGATAGATGTACAAAGATTTAATATTATATTATTTGAAGAAACAACTGGTGCAGTGGTTTGAACCGAAGACATCTTGAACAAAAA

Protein sequence

Show/hide protein sequence

MESSLLPSVSSPLLLHRRIGSSSSPRFSSTVLVRCSSKSHAYIPKLEPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLIL
QAGGVKSLIGCVHGITAIQQRKGKEKEARKGLKEVEGRGKDCPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Lsi10G003190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome