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Lsi10G003250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:5218280..5218516
RNA-Seq ExpressionLsi10G003250
SyntenyLsi10G003250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045984.1 hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa]1.6e-2780.77Show/hide
Query:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP
        MSGL+DLWTSEQAKLR EGGSSP A  VDGPV   VAEEGRWNFT+LTR WDRV++LG  GKMCSEASVS+LVEYMSP
Subjt:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP

KAE8651862.1 hypothetical protein Csa_006004, partial [Cucumis sativus]4.0e-2375.64Show/hide
Query:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP
        MSGLVDLWTSEQAKLR EGGSSP A  VD      VAE+GRWN T+LTR WDRV+RLG  GKMCSEASV MLVE+MSP
Subjt:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP

KAF5448743.1 hypothetical protein F2P56_029248, partial [Juglans regia]1.4e-0440.26Show/hide
Query:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMS
        MS LVD+WTSE AKLR +   + +  A   P P    +  + + T L++A+ R  R+     + SEASVSM+V+Y+S
Subjt:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMS

TrEMBL top hitse value%identityAlignment
A0A0A0LIK6 Uncharacterized protein2.0e-2375.64Show/hide
Query:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP
        MSGLVDLWTSEQAKLR EGGSSP A  VD      VAE+GRWN T+LTR WDRV+RLG  GKMCSEASV MLVE+MSP
Subjt:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP

A0A2N9ERE7 Uncharacterized protein4.5e-0444.58Show/hide
Query:  MSGLVDLWTSEQAKLRREG------GSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMS
        MSGLVD+WTSE AKLR +G      G+SPT A  +  V     +EG  + T L  A+ R   +     +CSEAS+SMLV+  S
Subjt:  MSGLVDLWTSEQAKLRREG------GSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMS

A0A5D3CQ79 Uncharacterized protein7.7e-2880.77Show/hide
Query:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP
        MSGL+DLWTSEQAKLR EGGSSP A  VDGPV   VAEEGRWNFT+LTR WDRV++LG  GKMCSEASVS+LVEYMSP
Subjt:  MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP

A0A6A1V3A9 Uncharacterized protein5.9e-0444.05Show/hide
Query:  MSGLVDLWTSEQAKLRREG------GSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRL-GPIGKMCSEASVSMLVEYMS
        MS LVD+WTSE AK+R +G      GSSP  AA    +     EEG  + T   +A+ +  R   P+    SEASVSM+VEY+S
Subjt:  MSGLVDLWTSEQAKLRREG------GSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRL-GPIGKMCSEASVSMLVEYMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCCTTGTAGACCTCTGGACTTCCGAACAGGCCAAACTCCGCCGCGAAGGTGGCTCCTCCCCCACCGCTGCCGCCGTTGACGGCCCGGTTCCAGCTGCTGTGGC
TGAAGAAGGAAGATGGAACTTCACTAAGTTAACTCGGGCTTGGGACCGAGTCAAGCGACTCGGTCCCATTGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATGTTGGTTG
AATATATGAGCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCCTTGTAGACCTCTGGACTTCCGAACAGGCCAAACTCCGCCGCGAAGGTGGCTCCTCCCCCACCGCTGCCGCCGTTGACGGCCCGGTTCCAGCTGCTGTGGC
TGAAGAAGGAAGATGGAACTTCACTAAGTTAACTCGGGCTTGGGACCGAGTCAAGCGACTCGGTCCCATTGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATGTTGGTTG
AATATATGAGCCCATAG
Protein sequenceShow/hide protein sequence
MSGLVDLWTSEQAKLRREGGSSPTAAAVDGPVPAAVAEEGRWNFTKLTRAWDRVKRLGPIGKMCSEASVSMLVEYMSP