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Lsi10G003260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:5228491..5228709
RNA-Seq ExpressionLsi10G003260
SyntenyLsi10G003260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571144.1 hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1472.22Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQ-KKKPLMPKSKQLQADQFKQPKNHMADSDDTESTTLSESTICLLIDRFAP
        MSAMVESWMSELGKWKNRVEAQ KKKPLMPKS     +QF Q     A SDDTE+    E+TICLLIDRFAP
Subjt:  MSAMVESWMSELGKWKNRVEAQ-KKKPLMPKSKQLQADQFKQPKNHMADSDDTESTTLSESTICLLIDRFAP

KAG6605111.1 hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1165.71Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQPKNHM---ADSDDTESTTLSESTICLLID
        M+AMVESWMSELGKWKNRVEAQKKKPLMPKSK       K+ +N++   ADSDD E+ TLS+STI  + D
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQPKNHM---ADSDDTESTTLSESTICLLID

KGN61756.1 hypothetical protein Csa_006080 [Cucumis sativus]6.3e-2382.89Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSKQLQADQFKQP-KNHMADSDDTESTTLSESTICLLIDRFAPL
        MSAMVESWM+ELGKW+NRVEAQ    KKPLMPKSKQLQ D FKQP K HMADSDDTE++ LSESTICLLIDRFAPL
Subjt:  MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSKQLQADQFKQP-KNHMADSDDTESTTLSESTICLLIDRFAPL

OMO75267.1 hypothetical protein CCACVL1_16259 [Corchorus capsularis]5.1e-0443.24Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A +++PL   S+  +  Q  +    +   A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP

PQM32847.1 hypothetical protein Pyn_36094 [Prunus yedoensis var. nudiflora]3.9e-0442.17Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP
        MSA+VE WMSEL K K++V A+K+     K+KQ + D           + ++  + MA    D +S+TLSE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP

TrEMBL top hitse value%identityAlignment
A0A0A0LP24 Uncharacterized protein3.1e-2382.89Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSKQLQADQFKQP-KNHMADSDDTESTTLSESTICLLIDRFAPL
        MSAMVESWM+ELGKW+NRVEAQ    KKPLMPKSKQLQ D FKQP K HMADSDDTE++ LSESTICLLIDRFAPL
Subjt:  MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSKQLQADQFKQP-KNHMADSDDTESTTLSESTICLLIDRFAPL

A0A1R3HY48 Uncharacterized protein2.4e-0443.24Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A +++PL   S+  +  Q  +    +   A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP

A0A1R3JBF3 Uncharacterized protein2.4e-0443.24Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A +++PL   S+  +  Q  +    +   A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQP---KNHMADSDDTESTTLSESTICLLIDRFAP

A0A314U608 Uncharacterized protein1.9e-0442.17Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP
        MSA+VE WMSEL K K++V A+K+     K+KQ + D           + ++  + MA    D +S+TLSE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP

A0A314ZRL0 Uncharacterized protein2.4e-0442.17Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP
        MSA+VE WMSEL K K++V A+K+     K+KQ + D           + ++    MA    D +S+TLSE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQAD-----------QFKQPKNHMAD-SDDTESTTLSESTICLLIDRFAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCAAGCAGA
TCAATTCAAACAACCCAAAAACCACATGGCGGATTCCGACGACACAGAATCCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGCTTTGCTCCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCAAGCAGA
TCAATTCAAACAACCCAAAAACCACATGGCGGATTCCGACGACACAGAATCCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGCTTTGCTCCCTTGTGA
Protein sequenceShow/hide protein sequence
MSAMVESWMSELGKWKNRVEAQKKKPLMPKSKQLQADQFKQPKNHMADSDDTESTTLSESTICLLIDRFAPL