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Lsi10G003280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:5237725..5237943
RNA-Seq ExpressionLsi10G003280
SyntenyLsi10G003280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571144.1 hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0859.15Show/hide
Query:  MSAMVESWMNELEKLKNRAEAQRKKKPLMSNSKQLQPPPHLKQHTDSDSDDTESTILSESTISLLIDRFSP
        MSAMVESWM+EL K KNR EAQ+KKKPLM  S Q      +  H    SDDTE+    E+TI LLIDRF+P
Subjt:  MSAMVESWMNELEKLKNRAEAQRKKKPLMSNSKQLQPPPHLKQHTDSDSDDTESTILSESTISLLIDRFSP
KGN61756.1 hypothetical protein Csa_006080 [Cucumis sativus]1.5e-1166.23Show/hide
Query:  MSAMVESWMNELEKLKNRAEAQ--RKKKPLMSNSKQLQPPPHLKQHTD---SDSDDTESTILSESTISLLIDRFSPL
        MSAMVESWMNEL K +NR EAQ    KKPLM  SKQLQ   H KQ      +DSDDTE+++LSESTI LLIDRF+PL
Subjt:  MSAMVESWMNELEKLKNRAEAQ--RKKKPLMSNSKQLQPPPHLKQHTD---SDSDDTESTILSESTISLLIDRFSPL
TrEMBL top hitse value%identityAlignment
A0A0A0LP24 Uncharacterized protein7.1e-1266.23Show/hide
Query:  MSAMVESWMNELEKLKNRAEAQ--RKKKPLMSNSKQLQPPPHLKQHTD---SDSDDTESTILSESTISLLIDRFSPL
        MSAMVESWMNEL K +NR EAQ    KKPLM  SKQLQ   H KQ      +DSDDTE+++LSESTI LLIDRF+PL
Subjt:  MSAMVESWMNELEKLKNRAEAQ--RKKKPLMSNSKQLQPPPHLKQHTD---SDSDDTESTILSESTISLLIDRFSPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCATGGTAGAGTCATGGATGAACGAGCTGGAGAAGTTGAAGAACAGAGCTGAAGCTCAAAGGAAGAAGAAGCCATTGATGTCCAATTCCAAGCAATTACAGCC
ACCACCACACCTCAAACAACACACAGATTCCGATTCCGACGATACAGAATCCACCATCCTCTCCGAATCCACCATTTCTTTGCTCATAGATCGCTTTTCTCCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCATGGTAGAGTCATGGATGAACGAGCTGGAGAAGTTGAAGAACAGAGCTGAAGCTCAAAGGAAGAAGAAGCCATTGATGTCCAATTCCAAGCAATTACAGCC
ACCACCACACCTCAAACAACACACAGATTCCGATTCCGACGATACAGAATCCACCATCCTCTCCGAATCCACCATTTCTTTGCTCATAGATCGCTTTTCTCCCTTGTAA
Protein sequenceShow/hide protein sequence
MSAMVESWMNELEKLKNRAEAQRKKKPLMSNSKQLQPPPHLKQHTDSDSDDTESTILSESTISLLIDRFSPL