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Lsi10G003450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:5388339..5398982
RNA-Seq ExpressionLsi10G003450
SyntenyLsi10G003450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5448753.1 hypothetical protein F2P56_029258 [Juglans regia]3.2e-1244.21Show/hide
Query:  VMSLKRRPVTPASSLPPAPMTQSTHFLVKVELDFTIAECHRELSATWVKIKTTSFAVVNEASDILLTGIAESRSVARLARHELKGALGVERILES
        ++ L  RP+ PA   PP  + +  +FL+++EL+F I E H EL ATWV+IK    AVV++  D+L   IA +  VAR  R EL+ A GVER+++S
Subjt:  VMSLKRRPVTPASSLPPAPMTQSTHFLVKVELDFTIAECHRELSATWVKIKTTSFAVVNEASDILLTGIAESRSVARLARHELKGALGVERILES
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGACCGTATAAAAACGGCGGAAATGCACTGAATATGAGGAAAAGGGACCCCGATGACCCCGGCAATCAGAGCCGTTGGATCTCCCAGTACTGCAGATATAACAG
TTTGGACGGCCATACCAGCCATCTCACAACACCTCTTCATCTTGCCCTTGCCCTTGTTGTGATGAGTCTGAAGAGAAGACCTGTAACTCCAGCTTCTTCCCTTCCGCCCG
CACCTATGACACAAAGCACTCACTTTCTTGTAAAGGTAGAGCTTGATTTCACCATCGCTGAGTGCCATCGGGAGCTTAGCGCAACATGGGTGAAGATCAAAACCACAAGC
TTTGCAGTGGTAAATGAAGCCAGTGACATCCTTCTCACAGGCATTGCAGAATCGAGGAGTGTTGCCAGGCTGGCGAGACATGAACTGAAAGGAGCACTTGGTGTAGAAAG
GATCCTTGAGAGTATTGATTACAGATATGGATTTGTTAAATTTCAAGATAAGTCGAGATGCGTGCAAGCTAATTCAGACACTTAA
mRNA sequenceShow/hide mRNA sequence
CCTTGAAGGCATTCTCAGCTTTCTGCTCTATTTCCATTTACCGAAACAAATTCATCTCTGAACTACACAGCTTTCGCCATAGACGCATTCTTCAGATGCAATCTTGTCAC
CATTCGCCGTCAGCCTCCGGTTCTTCTTCCAAATGGTTTTAAACCCAGTTCGCCTGAATCTCAGTACAACGTCCCTGCCGCTCCGATTCGGTACCCAACGGCGGTCGGCG
CCGCTTTCAATGACGGATACGCCTTCTTGGAGCTAGCGAGGGCCACATTTGCTTTGGCGGCCAATTCACATAAATCCGTTAGGGAGATCCGCAGATGGGCTTTAGCGAGC
GGGATTAGAAAATAAATTTCACCCAATTCGAGTTCTCTGTCGCTGGAAATTTGGGGAACGATTGAATCGATTTTCATAGATTCTGAACTACAGAGGAAACAGTTGGGATT
TTGATTGAGAATGTGGCCAGCCTTTACTGGGTGCCTCAATTCTTGTAGCCTACCATCTGTATGAATAATTTTCGCAGTGAAGGGCCAATTCGTGAGGGTAGCATTTGAGT
GCTGTGATGAGGCACAAACCCCCATGATTTTTGCTTTTCTAGAGAAATGGAAGAGGGAAAAATGGTGAAATGGGTCGAATGGAGGAGAAGATGGGTACGTAGTGAATCAA
TTTATATATTTATATACAGAGAAAATTGAAAGAAGATTAGCAGGGCATGTGAATCATGGGTCCATGATAAGACCGTATAAAAACGGCGGAAATGCACTGAATATGAGGAA
AAGGGACCCCGATGACCCCGGCAATCAGAGCCGTTGGATCTCCCAGTACTGCAGATATAACAGTTTGGACGGCCATACCAGCCATCTCACAACACCTCTTCATCTTGCCC
TTGCCCTTGTTGTGATGAGTCTGAAGAGAAGACCTGTAACTCCAGCTTCTTCCCTTCCGCCCGCACCTATGACACAAAGCACTCACTTTCTTGTAAAGGTAGAGCTTGAT
TTCACCATCGCTGAGTGCCATCGGGAGCTTAGCGCAACATGGGTGAAGATCAAAACCACAAGCTTTGCAGTGGTAAATGAAGCCAGTGACATCCTTCTCACAGGCATTGC
AGAATCGAGGAGTGTTGCCAGGCTGGCGAGACATGAACTGAAAGGAGCACTTGGTGTAGAAAGGATCCTTGAGAGTATTGATTACAGATATGGATTTGTTAAATTTCAAG
ATAAGTCGAGATGCGTGCAAGCTAATTCAGACACTTAA
Protein sequenceShow/hide protein sequence
MIRPYKNGGNALNMRKRDPDDPGNQSRWISQYCRYNSLDGHTSHLTTPLHLALALVVMSLKRRPVTPASSLPPAPMTQSTHFLVKVELDFTIAECHRELSATWVKIKTTS
FAVVNEASDILLTGIAESRSVARLARHELKGALGVERILESIDYRYGFVKFQDKSRCVQANSDT