; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G003530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr10:5525270..5529276
RNA-Seq ExpressionLsi10G003530
SyntenyLsi10G003530
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-12489.31Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+PQL    SRRSIVSA+PRPY D STIGLSSKT+GAPL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]1.9e-12692.37Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSIPQLSR    RSIVSALPRPY D STIGLSSKT GAPL LDDKDFL TSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ+IEKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]1.0e-12489.31Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+PQL    SRRSIVSA+PRPY D STIGLSSKT+GAPL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]2.3e-12993.89Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSI QLSR    RSIVSALPRPY D STIGLSSKT+G PL +DDKDFLHTSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ IEKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

XP_038902837.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X2 [Benincasa hispida]6.8e-12993.51Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSI QLSR    RSIVSALPRPY D STIGLSSKT+G PL +DDKDFLHTSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ IEKVQQYTERDRFLSVSE  +
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit6.2e-12086.64Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASLSFSV+S+NR SSI QLSR    RSIVSA PRPY D STIGLSSKT GAPL LDDKDFL TSTSY PIVAR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ+IE +QQY +RDRFLSVSE+ +
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit9.0e-12792.37Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSIPQLSR    RSIVSALPRPY D STIGLSSKT GAPL LDDKDFL TSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ+IEKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit1.9e-12489.66Show/hide
Query:  VVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS
        + ASAFTASL+FSVSS+NRTSSIP LSR    RS+VS LPRPY D STIGLSSK+I APL+LDDKDFLH STSY PI A+KGNPPIMPAVMTPGGPLDLS
Subjt:  VVASAFTASLSFSVSSHNRTSSIPQLSR----RSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        IHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKM++AFTGQ +EKVQQYTERDRFLSVSE+ E
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit4.9e-12589.31Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+PQL    SRRSIVSA+PRPY D STIGLSSKT+GAPL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit2.4e-12488.55Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASL FSVSSHNR SS+PQL    SRRSIVSA+PRPY D STIGLSSKT+G PL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQL----SRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE+ E
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

SwissProt top hitse value%identityAlignment
B4UAX9 ATP-dependent Clp protease proteolytic subunit2.9e-3748.78Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        RIMIHQ   G  G   D+  Q  EA++ + K++++ A  T Q IE++++ TERD F+S  E+ E
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

B8J5G7 ATP-dependent Clp protease proteolytic subunit2.9e-3748.78Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        RIMIHQ   G  G   D+  Q  EA++ + K++++ A  T Q IE++++ TERD F+S  E+ E
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

Q2IEW1 ATP-dependent Clp protease proteolytic subunit2.9e-3748.78Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        RIMIHQ   G  G   D+  Q  EA++ + K++++ A  T Q IE++++ TERD F+S  E+ E
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

Q59993 ATP-dependent Clp protease proteolytic subunit 21.7e-3746.11Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQ +EK+Q+ TERD F+S  E+ E
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic1.1e-9774.29Show/hide
Query:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVN
        S  SHN+ + I     R IVSAL  PY D    GLSS   G+P+ +D+K     +  +G I A+KGNPP+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N
Subjt:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVN

Query:  SIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVR
        + VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVR
Subjt:  SIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVR

Query:  RQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        RQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE+ E
Subjt:  RQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.4e-3442.41Show/hide
Query:  STSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV
        S+ Y P  A+   PP M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TV
Subjt:  STSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV

Query:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        C G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ++EK+ Q T+RD F+S  E+ E
Subjt:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

AT1G11750.1 CLP protease proteolytic subunit 67.8e-9974.29Show/hide
Query:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVN
        S  SHN+ + I     R IVSAL  PY D    GLSS   G+P+ +D+K     +  +G I A+KGNPP+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N
Subjt:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVN

Query:  SIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVR
        + VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVR
Subjt:  SIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVR

Query:  RQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        RQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE+ E
Subjt:  RQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

AT1G11750.2 CLP protease proteolytic subunit 61.0e-9872.09Show/hide
Query:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDK----------DFLHTSTSY---GPIVARKGNPPIMPAVMTPGGPLDLSSVL
        S  SHN+ + I     R IVSAL  PY D    GLSS   G+P+ +D+K          + L +ST Y   G I A+KGNPP+MP+VMTPGGPLDLSSVL
Subjt:  SVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDK----------DFLHTSTSY---GPIVARKGNPPIMPAVMTPGGPLDLSSVL

Query:  FRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQ
        FRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQ
Subjt:  FRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQ

Query:  PQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        PQ+GCGGHVEDVRRQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE+ E
Subjt:  PQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

AT1G66670.1 CLP protease proteolytic subunit 35.2e-3442.42Show/hide
Query:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        S++MIHQP    GG   ++  ++ E +  + K++K+++  TG+   +++  T+RD FL+  E+ E
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE

AT5G45390.1 CLP protease P41.8e-3138.1Show/hide
Query:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA
        G   D+  +L R RI+F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+A
Subjt:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA

Query:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE
        MPN+RIMIHQP  G  G   DV  Q  E + +++ +  + A  T ++ E+V +  +RDR++S  E+ E
Subjt:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTAGCTTCAGCTTTTACTGCCTCTCTCAGTTTCTCTGTCTCTTCACACAATCGAACGTCGTCCATTCCTCAACTTTCTCGAAGGTCGATAGTGTCTGCCTTGCC
GAGGCCCTATGACGACCCTTCGACAATTGGATTATCGAGTAAAACAATTGGGGCACCTCTAACCCTTGACGATAAGGACTTTCTTCACACCAGTACAAGTTATGGTCCTA
TAGTGGCTAGGAAAGGTAATCCACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAA
CCTGTCAACTCAATTGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCTGATATCCTGGTATATCTGAATTGCCCTGGTGGAAGTAC
ATACTCGGTATTGGCAATTTATGATTGTATGTCTTGGATAAAGCCGAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAG
AAAAGGGAATGCGCTATGCTATGCCCAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGGCGCCAAGTCAATGAAGCAGTT
CAATCACGCCATAAAATTGACAAGATGTATGCTGCATTTACTGGCCAGACTATAGAGAAAGTACAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGTCTGC
GGAATCATCTTCTCCAAGCTTTGGTACAGAACATCAAAATTTCAGTCCAAATTTCCAGCGCTGTGCATCGTTTCATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATCGATATTGTTGTAATTTCCATAGTCTCTTTTGTTTTTCAGTGAATAAGCTCGAGAACACAGCGCCATTCCCACAAGCTTCGCTCAAAATGGTAGTAGCTTCAGCTTTT
ACTGCCTCTCTCAGTTTCTCTGTCTCTTCACACAATCGAACGTCGTCCATTCCTCAACTTTCTCGAAGGTCGATAGTGTCTGCCTTGCCGAGGCCCTATGACGACCCTTC
GACAATTGGATTATCGAGTAAAACAATTGGGGCACCTCTAACCCTTGACGATAAGGACTTTCTTCACACCAGTACAAGTTATGGTCCTATAGTGGCTAGGAAAGGTAATC
CACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCAATTGTGGCA
CAGCGAGTCATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCTGATATCCTGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTGGCAATTTA
TGATTGTATGTCTTGGATAAAGCCGAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTA
TGCCCAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGGCGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAATTGAC
AAGATGTATGCTGCATTTACTGGCCAGACTATAGAGAAAGTACAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGTCTGCGGAATCATCTTCTCCAAGCTT
TGGTACAGAACATCAAAATTTCAGTCCAAATTTCCAGCGCTGTGCATCGTTTCATTGGTAA
Protein sequenceShow/hide protein sequence
MVVASAFTASLSFSVSSHNRTSSIPQLSRRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQ
PVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAV
QSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSESAESSSPSFGTEHQNFSPNFQRCASFHW