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Lsi10G003560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionorgan-specific protein P4-like
Genome locationchr10:5567369..5569635
RNA-Seq ExpressionLsi10G003560
SyntenyLsi10G003560
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571127.1 hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2460.87Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN
        MKLS+AFFLLLSL+LF ++SHG SRK  ++G+YWKK+MK+E IPEMLKELL DD+ +        NQK+ FM NFDPHPNAIIYHAHAHA  H       
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN

Query:  NHHLKINPTLPNSSP
        N  +K NPT+ NS+P
Subjt:  NHHLKINPTLPNSSP

XP_004148852.1 uncharacterized protein LOC101213460 [Cucumis sativus]1.1e-2668.14Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLM--DDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHH
        MKLS+AFF LLSLLL G+++HG SRK  EEGEYWKKIMK+EA+PEMLKELL+  DD S + + ++N  QKEHF+TNFDPHPNAIIYHAHAHA  HN+   
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLM--DDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHH

Query:  LKINPT-LPNSSP
           NPT LPN SP
Subjt:  LKINPT-LPNSSP

XP_022944721.1 organ-specific protein P4-like [Cucurbita moschata]1.1e-2360Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN
        MKLS+AFFLL+SL+LF ++SHG SRK  ++G+YWKK+MK+E IPEMLKELL DD+ +        NQK+ FM NFDPHPNAIIYHAHAHA  H       
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN

Query:  NHHLKINPTLPNSSP
        N  +K NPT+ NS+P
Subjt:  NHHLKINPTLPNSSP

XP_022986644.1 organ-specific protein S2-like [Cucurbita maxima]3.0e-2459.83Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNN-----
        MKLS+AFFLLLSL+LF ++SHG SRK  ++G+YWKK+MK+E IPEMLKELL DD+ +        NQK+ FM NFDPHPNAIIYHAHAHA  H +     
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNN-----

Query:  --NHHLKINPTLPNSSP
          N  +K NPT+ NS+P
Subjt:  --NHHLKINPTLPNSSP

XP_038901980.1 organ-specific protein P4 [Benincasa hispida]1.2e-3683.78Show/hide
Query:  MKLSVAFF-LLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHHL
        MKLSVAFF LLLSLLL GEISHG SRK  EEGEYWKKIMKDE IP++LKE L+DDNSLVD     NN+KEHFMTNFDPHPNAIIYH  AHASTHNNNHHL
Subjt:  MKLSVAFF-LLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHHL

Query:  KINPTLPNSSP
        KINPTLPNSSP
Subjt:  KINPTLPNSSP

TrEMBL top hitse value%identityAlignment
A0A0A0LP62 Uncharacterized protein5.4e-2768.14Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLM--DDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHH
        MKLS+AFF LLSLLL G+++HG SRK  EEGEYWKKIMK+EA+PEMLKELL+  DD S + + ++N  QKEHF+TNFDPHPNAIIYHAHAHA  HN+   
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLM--DDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHH

Query:  LKINPT-LPNSSP
           NPT LPN SP
Subjt:  LKINPT-LPNSSP

A0A6J1D5L4 organ-specific protein P49.2e-1958.76Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNH
        MKLSVAFFLLLSLLLF E  +G     +++GEYWKKIMK+E IPE+LKELL DD+           Q E FM+NFDPHPNAIIYH+H+H +   + H
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNH

A0A6J1FYV4 organ-specific protein P4-like5.5e-2460Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN
        MKLS+AFFLL+SL+LF ++SHG SRK  ++G+YWKK+MK+E IPEMLKELL DD+ +        NQK+ FM NFDPHPNAIIYHAHAHA  H       
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTH-----NN

Query:  NHHLKINPTLPNSSP
        N  +K NPT+ NS+P
Subjt:  NHHLKINPTLPNSSP

A0A6J1G7K5 organ-specific protein P4-like4.1e-1959.43Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHHLK
        MKLS AFFLL  L+L   +SH      +E+GEYWKK+MKDEAIPEMLKELL DD+SLV  D     Q EHFM NFD HPNAIIY  H+H +TH++  H K
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHHLK

Query:  INPTLP
          P+ P
Subjt:  INPTLP

A0A6J1JGL9 organ-specific protein S2-like1.5e-2459.83Show/hide
Query:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNN-----
        MKLS+AFFLLLSL+LF ++SHG SRK  ++G+YWKK+MK+E IPEMLKELL DD+ +        NQK+ FM NFDPHPNAIIYHAHAHA  H +     
Subjt:  MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNN-----

Query:  --NHHLKINPTLPNSSP
          N  +K NPT+ NS+P
Subjt:  --NHHLKINPTLPNSSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49310.1 unknown protein2.3e-0641.98Show/hide
Query:  VAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYH
        V F +LLS LLF  +S G +    E  EYWKK+MK+E +PE +KELL         ++     +E F+ NFD     IIYH
Subjt:  VAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCTGTTGCTTTCTTCCTTCTCCTCTCTCTTCTCCTGTTTGGAGAAATAAGCCATGGAATTAGCAGGAAGGAAGAAGAAGAAGGAGAATATTGGAAAAAGAT
AATGAAAGATGAAGCAATTCCAGAGATGCTTAAAGAACTTTTAATGGATGATAATTCATTGGTTGACGACGACGACGACAACAACAATCAAAAGGAGCATTTTATGACCA
ACTTTGATCCTCATCCAAATGCTATAATTTACCATGCTCATGCTCATGCCTCCACTCATAACAATAATCATCATCTCAAAATCAACCCCACTCTTCCCAATTCATCCCCA
TGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATAATAATAATAATAACAATAATAATAATATAGCTTCTGGCTTCAGCTGTTGTGAGACAGAGAACATGAAGCTTTCTGTTGCTTTCTTCCTTCTCCTCTCTCTTC
TCCTGTTTGGAGAAATAAGCCATGGAATTAGCAGGAAGGAAGAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGCTTAAAGAACTT
TTAATGGATGATAATTCATTGGTTGACGACGACGACGACAACAACAATCAAAAGGAGCATTTTATGACCAACTTTGATCCTCATCCAAATGCTATAATTTACCATGCTCA
TGCTCATGCCTCCACTCATAACAATAATCATCATCTCAAAATCAACCCCACTCTTCCCAATTCATCCCCATGAATCTTCTTAATTTCCCAAATATATATTACTAATTATA
AGAACTTCCCAACCTTTTCTGTAAATTAACATATTTACGGTGTGTTTTTCTTTTATATACCCTTTCAACTTTGTCCTTTGTTTAAAAAAAATTTATATATACTTTAAAAA
GTATTTGCAATATTACCTTCCAATGATTTTTATAGACGTTTTCAAAAGTATTGTAGTATAATTCTCTGTATGACGATTACGTAAAACGATGTGGTGATGTAAATTTTCGT
TATAGATTGTTGTTGCAATACTCTTTTGTATTACGGTTTTAGTTTGAAATTTTAAAGATTCTCTACTCTAAATAGTATTTTTGAAATGTTTGAAGAAAGTTCATGGATAA
TAATATTACAACTTTTGAAAGTGTATAGAAAGTTTATGGTATTTTTTTATATTATTTGGGTTTGAGATTTTTAT
Protein sequenceShow/hide protein sequence
MKLSVAFFLLLSLLLFGEISHGISRKEEEEGEYWKKIMKDEAIPEMLKELLMDDNSLVDDDDDNNNQKEHFMTNFDPHPNAIIYHAHAHASTHNNNHHLKINPTLPNSSP