; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G003660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich RNA-binding protein-like
Genome locationchr10:5657381..5660065
RNA-Seq ExpressionLsi10G003660
SyntenyLsi10G003660
Gene Ontology termsGO:0006858 - extracellular transport (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:1990428 - miRNA transport (biological process)
GO:0050688 - regulation of defense response to virus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005615 - extracellular space (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0035198 - miRNA binding (molecular function)
GO:0035197 - siRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 - RNA recognition motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571119.1 hypothetical protein SDJN03_30034, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6091.86Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG

Query:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN
        GGGGGYGGRRE GGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R GGGGGGSEGGWRN
Subjt:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN

XP_022943401.1 glycine-rich RNA-binding protein-like [Cucurbita moschata]1.6e-6191.33Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR---GGGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R   GGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR---GGGGGGSEGGWRN

XP_023512522.1 glycine-rich RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]1.5e-5992.4Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTFAEEE+MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN
        GGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGY GGGRDRGY GGGDGGSRY+R GGGGGGSEGGWRN
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN

XP_023533100.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-5890.64Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGY+RGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGG  G RY R GGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR-GGGGGGSEGGWRN

XP_038901242.1 glycine-rich RNA-binding protein-like [Benincasa hispida]1.5e-5992.4Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG
        MASSSVE+RCFVGGLAWATD+ ALEKAF+ FGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGY+RGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYSRGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RG GGY  GGGGYGGGGYGGGRDR Y GGGGDGGSRYSRGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYSRGGGGGGSEGGWRN

TrEMBL top hitse value%identityAlignment
A0A1S3CE16 glycine-rich RNA-binding protein 1-like2.5e-5588.3Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATDSNALEKAF+ FGDIVEAKIV+DRETGRSRGFGFVTF+EE+AMRSAIEAMNG  LDGR+ITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGD-GGSRYSRGGGGGGSEGGWRN
        GGGGYGGRR+GGGGGG+SRGGGGYGGGGGGY GGGGYGGGRDRGYGGGG  GG R +RGGGGGGSEGGWRN
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGD-GGSRYSRGGGGGGSEGGWRN

A0A6J1FRL7 glycine-rich RNA-binding protein-like7.9e-6291.33Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR-GG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR---GGGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R   GGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR---GGGGGGSEGGWRN

A0A6J1G631 glycine-rich RNA-binding protein 1-like4.0e-5890.7Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGY+RGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYSRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDG-GSRYSR-GGGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGG G G RY R GGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDG-GSRYSR-GGGGGGSEGGWRN

A0A6J1JGK0 glycine-rich RNA-binding protein-like4.5e-5789.08Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR---
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R   
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR---

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGGSEGGWRN
        GGGGGGGYGGRRE GGGGGY+RGGGGY  GGGGGGYGGGGYGGGRDRGY GGGDGGSRY+R GGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGGSEGGWRN

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X14.0e-5890.23Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG
        MASSSVEYRCFVGGLAWATD++ALEKAF+ FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQR  GGGGGGGY+RG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG

Query:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGDG-GSRYSR-GGGGGGSEGGWRN
        GGGGGGYGGRREGGGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGG G G RY R GGGGGGSEGGWRN
Subjt:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGDG-GSRYSR-GGGGGGSEGGWRN

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.0e-3468Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+Q+G+++++KI+NDRETGRSRGFGFVTF +E++M+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG   G G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGGGG--GGYGGGGYG----GGRDRGYGGGG--DGGSRYSRGGGGGGSEGGW
        GGGGY      GGGGGY  GGGGYGGGG  GGY GGG G    GG   GYGGGG  DGG     GG GGG  GGW
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGGGG--GGYGGGGYG----GGRDRGYGGGG--DGGSRYSRGGGGGGSEGGW

Q03250 Glycine-rich RNA-binding protein 71.6e-3567.4Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-
        MAS  VEYRCFVGGLAWATD  ALE AFAQ+GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GG 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G G  GGG+GG     G GG G  GGW
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW

Q03878 Glycine-rich RNA-binding protein2.6e-3872.96Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG----
        + VEYRCFVGGLAWAT+  +LE+AF+QFGDI ++KI+NDRETGRSRGFGFVTF +E++MR AIE MNGQ LDGR+ITVNEAQ RG GGGGG   GG    
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG----

Query:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY
        GGGGGYGGRREGGGGGGY      GGGGYGGGGGGYGG   GG  D GYGGGG GGSR+
Subjt:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY

Q43472 Glycine-rich RNA-binding protein blt8013.9e-3468.26Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        + VEYRCFVGGL WATD  +L+ AF+++GD++++KI+ DRETGRSRGFGFVTFA +EAMR AIEAMNGQ+LDGR+ITVNEAQ R   GGGG+   GGGGG
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGG--GRDRGYGGGGDGGSRYSRGGGGGGSEGGWR
        GYGG+R  GGGGGY  GGGGYGGG  G GGGGYG   G   GYGGGG GG   SRGG GGG+   WR
Subjt:  GYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGG--GRDRGYGGGGDGGSRYSRGGGGGGSEGGWR

Q99070 Glycine-rich RNA-binding protein 21.0e-3465.91Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MA++ VEYRCFVGGLAWAT++  LE+AFA FG ++++K++ DRETGRSRGFGFVTF+ E++M  AIE MNG+ LDGR+ITVN+AQ RGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGG----SEGGWRN
        GGGGYGGR     GGGY  GGGGYGG   GGGGYGGGGYGGG   GY GG +GG  Y  GGG GG    S G WRN
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGG----SEGGWRN

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.1e-3667.4Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-
        MAS  VEYRCFVGGLAWATD  ALE AFAQ+GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GG 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G G  GGG+GG     G GG G  GGW
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW

AT2G21660.2 cold, circadian rhythm, and rna binding 22.3e-3771.01Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AFAQ+GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+ RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW
          GG GGRRE  GGGGYS GGGGY   GG  GGG YGGGR  G G  GGG+GG     G GG G  GGW
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYG--GGGDGGSRYSRGGGGGGSEGGW

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.7e-3266.67Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY
        S VEYRCFVGGLAWAT+   L++ F+QFGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG        GG GGGY
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY

Query:  SRGGGGG--GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG--RDRGYGGGGDGGSRYSRGGGGGG
          GGGGG  GG GG   GGGGGGY R  GGYG GGGG GG GYGGG  R+ G  GGGDGG   S GGGGGG
Subjt:  SRGGGGG--GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG--RDRGYGGGGDGGSRYSRGGGGGG

AT4G39260.2 cold, circadian rhythm, and RNA binding 11.9e-3166.91Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        S VEYRCFVGGLAWAT+   L++ F+QFGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG GG      GGGG G
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG
        G GG    GGGGGYS      GGGGGGY GGG GGG
Subjt:  GYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG

AT5G61030.1 glycine-rich RNA-binding protein 31.4e-1854.71Show/hide
Query:  RCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGY
        + F+GG+A++ D ++L +AF ++G++V+ +++ DRETGRSRGFGFVTF   EA  SAI+A++G++L GR + VN A  R   GG GGGGY  GGGG GG 
Subjt:  RCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGY

Query:  GGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGG---GGDGGSRYSRGGGGG--GSEGGW
        GG   GGG GGY  G GGYGGG GGYG   GGGYGG    GYGG   GG GG     GG GG  GS GG+
Subjt:  GGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGG---GGDGGSRYSRGGGGG--GSEGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTTCGCTCAATTTGGTGATATCGTTGAAGC
CAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGGGGATTTGGATTCGTGACGTTTGCTGAGGAGGAGGCTATGAGGAGTGCTATTGAAGCAATGAACGGCCAGAATC
TCGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAGGTGGAGGTGGCGGTGGTGGTTACAGCCGTGGTGGTGGTGGTGGAGGTGGATACGGTGGACGACGTGAA
GGAGGAGGTGGTGGTGGATACAGCCGTGGAGGCGGTGGTTACGGAGGAGGTGGAGGTGGATACGGAGGAGGTGGTTATGGTGGTGGACGTGACCGTGGCTACGGCGGTGG
TGGTGATGGTGGTTCCCGTTACTCCAGGGGAGGCGGCGGCGGTGGATCTGAAGGAGGATGGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
CAGGCATACGCTTAACTAACCGAAGGATAAGATTTGGGGTGTATCCAAACAAGGTTACCAATCACACCGCCTTTTAGGTTAACCCTGATTGCAAAAGAACCGCGTTGGTT
CAATTTCCAGCAAACCCTAAAACTAACCCTAGTTAAATCTCCCCTCTATATAACAAACCCTATGCTTCTTCTCCAATTCATTGTGCCCTTGTTTAGAGGTTGGGATTTGT
GTTGATCCACCTCTTTCTCTCTATATCATTCCTCTCATTTTAGGGTTAGGGTTTTCAGTTCCGATTCAATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGC
CTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTTCGCTCAATTTGGTGATATCGTTGAAGCCAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGGGGATT
TGGATTCGTGACGTTTGCTGAGGAGGAGGCTATGAGGAGTGCTATTGAAGCAATGAACGGCCAGAATCTCGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAG
GTGGAGGTGGCGGTGGTGGTTACAGCCGTGGTGGTGGTGGTGGAGGTGGATACGGTGGACGACGTGAAGGAGGAGGTGGTGGTGGATACAGCCGTGGAGGCGGTGGTTAC
GGAGGAGGTGGAGGTGGATACGGAGGAGGTGGTTATGGTGGTGGACGTGACCGTGGCTACGGCGGTGGTGGTGATGGTGGTTCCCGTTACTCCAGGGGAGGCGGCGGCGG
TGGATCTGAAGGAGGATGGAGAAATTAGGCGGAGTTTTATGATTTTTTAGCTTTTGGTTTCGAAGTATTAGTGTGATGATAAAATCTTAGCAGGATCGCTCTTTTCGTTT
TCATTTTGTGGCTCTGTTTACTCTGTTCCGTTTGGGTGCTCTCTTTTTTGACCGATTACCGATGGGTTTCGTGTTCCTCATTATCGATCTATGTTACGATGAAGAAAAAA
AATTTACAAAAGAAAATGAAGTACAGATCTTCGTTCTCGCAAAAAGTTTGTTCTTCCTTCCTTCAAATCTCCATTATTGATTTCACCGTCATGGCCAAGATTCTTCCCAA
AAGGGAATATAAAAAAGCAAAATTCATTGAATATTTTTTTTTAAATTTTCAGAAAGAAAGTCAAGAAGATAATCATATTAAATGTTTTCCTCTTTTTCAAGAAAATTGGT
TGGTTCTTGTTTCCTTCTGATCCAATTGACAGCTGCACAAAAATATCTTACGGAGATATTTTCGTTCAAAAAGTTGTCAGATATTTACGCAATGATTTGGGCTTTTTGAT
TGGGCCCTCAATGGGTCGGCCACTTCGAGTTACGTGACGGACAAGTTGTGGAATCTGAACTATAATTATTTGTAATATTCGATTTTTGGGCAATGTATTTTTGTCGTTTT
TTTGGAGCGTGGAATATTGTGGGCCTGGGCTTTTTTAAATTCTCACATGGGCATCTGTCTCTATCGGGCCGCGTTCCAGATTAAAGATGGTTTGGATTATATGGTGTATT
AATTAATTACGCTAATTGTGGTAATTTGGAGTTAAAAAGTTGATCATCTTTTATATATTGTCAGATTTTTGTAATTATTGTTTCTTTCTGGGTAAAAGATTTGTAATTAT
TGTTTTTGTTACGTTATATGGTTAATTCTATGCTTCATTATTATTATTGGGTTTAATTTTATGAATTAAAAATAGAAAGTTTTAAGGGTTATGTCTTCTTGTGCAGTACA
TTTATTAGGTAAGTTGAAAATTTTGAAATTCGATGATTAATCAGATTGGTACATCTGAGATTTCTTGAATTCTATTTTATATATTTGGCAGTCAAGTTGGCTTAAAAAGA
AAAATTATGATTTTTTTAAACGAATCTTTATATTTCTCAATTCAAGATCAAAACCCTGATTTGTTCCTCCCTCTTTCACATCTAAATAAATTGAAAAAATAAATAAAAAA
TAAAAAAATAAGGAAATGATATGTAAAATAATTCATAGGACTTCAAATCTTGCAAATTTAAATTTAAATATGAAAAAAGAAAAAAAAGTTACAGTTATCCTAAATATGTC
AAGTAATTAATTTTTTACCACAGAATGTCATGAATATGCTTGAATTTTTGTGTCCCCTAGAAATCAGTATTCAATTTATTTATACCACTCAAATCAGTATATTTTAGAAA
TTACTATTCTTTCCATAGGTGTGATAAGCCCATAGAATATATTATGATATTCTTCCATGGGTTCGATATCAATATGAGAAGTGAATTGATATTTTCATTATATCGTAGAA
AAATCCACTTTACTTATTTAGAAATAATAAAATGTTTATTTACTAATTTAAATTTATTATTTTAAATTTTTTAGGGTTTATAATTTTTCT
Protein sequenceShow/hide protein sequence
MASSSVEYRCFVGGLAWATDSNALEKAFAQFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGGGYGGRRE
GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGGSEGGWRN