CuGenDBv2

Gene ID	Lsi10G003680
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Encodes a protein of unknown function that is a marker for oxidative stress response.
Genome location	chr10:5674961..5679172
RNA-Seq Expression	Lsi10G003680
Synteny	Lsi10G003680
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045538.1 uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa]

3.7e-39

95.51

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Query:  RFKPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        RF PMEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  RFKPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

KAG6605077.1 Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-38

95.4

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Query:  KPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        KPMEQQKE+PS AANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVAD+NSETSGVESSLPLRTT
Subjt:  KPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

XP_004148843.1 uncharacterized protein LOC101211034 [Cucumis sativus]

1.3e-36

95.29

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

XP_008460939.1 PREDICTED: uncharacterized protein LOC103499674 [Cucumis melo]

2.0e-37

96.47

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

XP_023006871.1 uncharacterized protein LOC111499535 [Cucurbita maxima]

7.7e-37

95.29

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PS AANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVAD+NSETSGVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIQ4 Uncharacterized protein

6.3e-37

95.29

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

A0A1S3CDL9 uncharacterized protein LOC103499674

9.8e-38

96.47

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

A0A5A7TRS7 Uncharacterized protein

1.8e-39

95.51

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Query:  RFKPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        RF PMEQQKE+PSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVADRNSET+GVESSLPLRTT
Subjt:  RFKPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

A0A6J1G5B9 uncharacterized protein LOC111450996

3.1e-36

94.12

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PS AANPPI SCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVAD+NSETSGVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

A0A6J1KX05 uncharacterized protein LOC111499535

3.7e-37

95.29

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT
        MEQQKE+PS AANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI+KMFRMSKVVAD+NSETSGVESSLPLRTT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.

1.3e-13

52.44

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Query:  NPPIP-----SCRKK-KNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKM---FRMSKVVADRNSETSG-VESSLPLRT
        NPP P     SCRK+ K++ ATF  +LKDH+DEFIHASMDEHK+CFK T+DK+   F  ++ VA++  E    VE   PL+T
Subjt:  NPPIP-----SCRKK-KNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKM---FRMSKVVADRNSETSG-VESSLPLRT

AT3G05570.1 unknown protein

1.7e-21

58.62

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Query:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETS--GVESSLPLRTT
        ME QK Q      P   SCRKK  ++A FLED+KDHID+FI+ASMD+HK+CF KTI KMF +SK VAD+    +  GVES LPL+TT
Subjt:  MEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETS--GVESSLPLRTT

AT4G39235.1 unknown protein

3.3e-22

62.5

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Query:  QPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNS-ETSGVESSLPLRTT
        Q + +  P + SCRKK  ++ATF ED+KDHID+FIHASMDEHKSCF+KTI KMF +SK VA++ + E  GVES LPL+TT
Subjt:  QPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNS-ETSGVESSLPLRTT

Sequences

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CDS sequence

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ATGGAACTGATTATATTCCTTTTTTTGCCTCATGTTGACAACTACGGTCCCAGGTTTAAACCAATGGAACAACAGAAAGAGCAACCATCAACTGCTGCAAACCCACCCAT
TCCTTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTCTTGGAGGATTTGAAGGATCACATCGACGAGTTCATTCACGCGTCAATGGACGAACACAAATCATGCTTCA
AGAAGACTATCGACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGAAATTCAGAGACGAGTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAAAAATTAGAAGT
GCTCACGACATTAAAAGAGACCTTAGTGATTTAAATTAA

mRNA sequence

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Protein sequence

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MELIIFLFLPHVDNYGPRFKPMEQQKEQPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTIDKMFRMSKVVADRNSETSGVESSLPLRTTKIRS
AHDIKRDLSDLN

Lsi10G003680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome