; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G003710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor bHLH78
Genome locationchr10:5721018..5726132
RNA-Seq ExpressionLsi10G003710
SyntenyLsi10G003710
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR024097 - Basic helix-loop-helix leucine zipper transcription factor
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045545.1 transcription factor bHLH78 [Cucumis melo var. makuwa]2.2e-6649.57Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        MFKSEMTVSAR KR+R   D  SLSSVSTPASRVDHFEDLVAP  WPEL KYEISS +FRTN   S  V+                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  ------------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNK
                                                                                      ARREKISERMKYLQNLVPGCNK
Subjt:  ------------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNK

Query:  IAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITA-NSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWG
        IAGKAGMLDEIINYVQSLQQQVE  F  +    L++ + ++          F TIT  N SSY NQ G MGSSS  +PQTPLINNNLS IT FE+SSTWG
Subjt:  IAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITA-NSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWG

Query:  GDLQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        G+LQRFEE  GGPPLLSPSSFLS QCS IEDENETLFMDH  ++P
Subjt:  GDLQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

XP_004148863.3 transcription factor bHLH78 isoform X2 [Cucumis sativus]1.7e-6648.98Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        M +SEMT SAR KR++   D  SLSSVSTPASRVDHFEDLVAP  WPEL KYEISS + RTN   S  V+                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  -----------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKI
                                                                                     ARREKISERMKYLQNLVPGCNKI
Subjt:  -----------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKI

Query:  AGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITANSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWGGD
        AGKAGMLDEIINYVQSLQQQVE  F  +    L++ + ++          FPTIT N SSY  QLG MGSSS T+PQTPLIN+NLS ITHFE+SSTWGG+
Subjt:  AGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITANSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWGGD

Query:  LQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        LQRFEE  GGPPLLSPSSFLS QCS IEDENETLFMDH  ++P
Subjt:  LQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

XP_038901960.1 transcription factor bHLH63-like isoform X1 [Benincasa hispida]1.3e-7755Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        MFKSEMTVSARLKRRR  G+C+SLSSVS PASRVDHFEDLV P    EL KYEISST+FR N  CSP VE                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  ------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAG
                                                                                ARREKISERMKYLQNLVPGCNKIAGKAG
Subjt:  ------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAG

Query:  MLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY--------------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQ
        MLDEIINYVQSLQQQVE  F       L++ + +              VFPTITA+ SSYFNQLGMGSSS TVPQTPLINNNLS ITHFELSSTWGGDLQ
Subjt:  MLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY--------------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQ

Query:  RFEE-GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        RFEE GGPPLLSPSSFLSQQCSGIEDENETLFMD HKVVP
Subjt:  RFEE-GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

XP_038901961.1 transcription factor bHLH63-like isoform X2 [Benincasa hispida]7.4e-7855.33Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        MFKSEMTVSARLKRRR  G+C+SLSSVS PASRVDHFEDLV P    EL KYEISST+FR N  CSP VE                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  ----------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGML
                                                                              ARREKISERMKYLQNLVPGCNKIAGKAGML
Subjt:  ----------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGML

Query:  DEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY--------------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF
        DEIINYVQSLQQQVE  F       L++ + +              VFPTITA+ SSYFNQLGMGSSS TVPQTPLINNNLS ITHFELSSTWGGDLQRF
Subjt:  DEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY--------------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF

Query:  EE-GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        EE GGPPLLSPSSFLSQQCSGIEDENETLFMD HKVVP
Subjt:  EE-GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

XP_038901962.1 transcription factor bHLH62-like isoform X3 [Benincasa hispida]4.3e-7855.65Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        MFKSEMTVSARLKRRR  G+C+SLSSVS PASRVDHFEDLV P    EL KYEISST+FR N  CSP VE                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  ------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAG
                                                                                ARREKISERMKYLQNLVPGCNKIAGKAG
Subjt:  ------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAG

Query:  MLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY----------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRFEE
        MLDEIINYVQSLQQQVE  F       L++ + +          VFPTITA+ SSYFNQLGMGSSS TVPQTPLINNNLS ITHFELSSTWGGDLQRFEE
Subjt:  MLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGY----------VFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRFEE

Query:  -GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
         GGPPLLSPSSFLSQQCSGIEDENETLFMD HKVVP
Subjt:  -GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

TrEMBL top hitse value%identityAlignment
A0A5D3DY78 Transcription factor bHLH781.1e-6649.57Show/hide
Query:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------
        MFKSEMTVSAR KR+R   D  SLSSVSTPASRVDHFEDLVAP  WPEL KYEISS +FRTN   S  V+                              
Subjt:  MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE------------------------------

Query:  ------------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNK
                                                                                      ARREKISERMKYLQNLVPGCNK
Subjt:  ------------------------------------------------------------------------------ARREKISERMKYLQNLVPGCNK

Query:  IAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITA-NSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWG
        IAGKAGMLDEIINYVQSLQQQVE  F  +    L++ + ++          F TIT  N SSY NQ G MGSSS  +PQTPLINNNLS IT FE+SSTWG
Subjt:  IAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYV----------FPTITA-NSSSYFNQLG-MGSSSQTVPQTPLINNNLSLITHFELSSTWG

Query:  GDLQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        G+LQRFEE  GGPPLLSPSSFLS QCS IEDENETLFMDH  ++P
Subjt:  GDLQRFEE--GGPPLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

A0A6J1G5R2 transcription factor bHLH63-like7.0e-5045.18Show/hide
Query:  KSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE----------------------------
        KSEMT+S +    +K RR  GDC SLS VS  ASRV+ F+DL+AP  WPEL KYE SST     +TCSPP E                            
Subjt:  KSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE----------------------------

Query:  -------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS
                                                                     ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS
Subjt:  -------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS

Query:  LQQQVE----KCFNYLTKIRLSN----GIGYVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQR-----FEEGGP
        LQQQVE    K      ++   N        VFP       TA SSSYFN+LG+ SSS TVPQTPLI++  + +T  EL STWG DLQR      EEGGP
Subjt:  LQQQVE----KCFNYLTKIRLSN----GIGYVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQR-----FEEGGP

Query:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        PLLS SSFL QQ  GIEDE ET F+D   V P
Subjt:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

A0A6J1JGG1 transcription factor HBI1-like isoform X14.0e-5352.75Show/hide
Query:  MFKSEMTVS----ARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISS--------TKFRTNQTC----------------------S
        MF +E TVS     R+K RR  GDCRSL SVSTPASRV+HFEDL+A   WPEL      S        T  ++++ C                      S
Subjt:  MFKSEMTVS----ARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISS--------TKFRTNQTC----------------------S

Query:  PPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE------KCFNYLTKIRLSNG--IGYVFPTI-----TANSSSYFNQLGMGSS
            ARREKIS RMKYLQNLVPGCNKI GKAGMLDEIINYV+SLQQQVE        FN+ + +   +   I  VFPTI     TAN SS FN+L +GSS
Subjt:  PPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE------KCFNYLTKIRLSNG--IGYVFPTI-----TANSSSYFNQLGMGSS

Query:  SQ--TVPQTPLINNNLSLITHFELSSTWGGDLQ-----RFEEGGPPLLSPSSFLSQQCSGIEDENETLFMDHH
        S   T+P+T   N+  S ITHFE SSTWGG+LQ      FEE GPPLLS SSFL QQCS IEDENET     H
Subjt:  SQ--TVPQTPLINNNLSLITHFELSSTWGGDLQ-----RFEEGGPPLLSPSSFLSQQCSGIEDENETLFMDHH

A0A6J1L4Z2 transcription factor bHLH63-like isoform X24.9e-5145.48Show/hide
Query:  MFKSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE--------------------------
        + KSEMT+S +    +K RR  GDC SLS VS PASRV+ F+DL+AP  WP+L KYE SST      TCSPP E                          
Subjt:  MFKSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE--------------------------

Query:  --------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ
                                                                      ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ
Subjt:  --------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ

Query:  SLQQQVEKCFNYLTK-------IRLSNGIG-YVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF----EEGGP
        SLQQQVE     L         I + +     VFP       TA SSSYFNQLG+ SSS TVPQTPLI++  + +TH EL STWG DLQR      EGGP
Subjt:  SLQQQVEKCFNYLTK-------IRLSNGIG-YVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF----EEGGP

Query:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        PLLS SSFL QQ  GIEDE ET F+D   V P
Subjt:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

A0A6J1L7P5 transcription factor bHLH63-like isoform X14.9e-5145.48Show/hide
Query:  MFKSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE--------------------------
        + KSEMT+S +    +K RR  GDC SLS VS PASRV+ F+DL+AP  WP+L KYE SST      TCSPP E                          
Subjt:  MFKSEMTVSAR----LKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVE--------------------------

Query:  --------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ
                                                                      ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ
Subjt:  --------------------------------------------------------------ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ

Query:  SLQQQVEKCFNYLTK-------IRLSNGIG-YVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF----EEGGP
        SLQQQVE     L         I + +     VFP       TA SSSYFNQLG+ SSS TVPQTPLI++  + +TH EL STWG DLQR      EGGP
Subjt:  SLQQQVEKCFNYLTK-------IRLSNGIG-YVFPTI-----TANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRF----EEGGP

Query:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP
        PLLS SSFL QQ  GIEDE ET F+D   V P
Subjt:  PLLSPSSFLSQQCSGIEDENETLFMDHHKVVP

SwissProt top hitse value%identityAlignment
Q69WS3 Transcription factor BHLH0947.1e-1539.74Show/hide
Query:  KRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSW--PELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYV
        KR +P+       S+ T A          A ++   PE  K +    + R  Q     S    ARREKISERMK LQ+LVPGCNK+ GKA +LDEIINY+
Subjt:  KRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSW--PELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYV

Query:  QSLQQQVEKCFNYLTKI--RLSNGIGYVFPTITANSSSYFNQLGMGSSSQT
        QSLQ QVE     L  +   + NGI   FP+    +  Y    G+    QT
Subjt:  QSLQQQVEKCFNYLTKI--RLSNGIGYVFPTITANSSSYFNQLGMGSSSQT

Q84T08 Transcription factor BHLH0899.2e-1535.84Show/hide
Query:  RLKRRRPLGDCRSL-SSVSTPASRVDHFEDLVAPRSWPELVKY-EISSTKFRTNQTCSPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ
        R K  +  GD  SL +   T +       D   P   P    Y  + + + +   + S    ARREKISERMK LQ+LVPGCNK+ GKA +LDEIINY+Q
Subjt:  RLKRRRPLGDCRSL-SSVSTPASRVDHFEDLVAPRSWPELVKY-EISSTKFRTNQTCSPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQ

Query:  SLQQQVEKCFNYLTKI--RLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTW
        +LQ+QVE     L  +   ++NGI   FP     +  Y    G+    QT P+     +  S   H ++  T+
Subjt:  SLQQQVEKCFNYLTKI--RLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTW

Q8GY61 Transcription factor bHLH633.2e-1547Show/hide
Query:  GDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE
        G  +S+  +   A + ++     + +   EL K +    + R  Q     S     RREKISERMK+LQ+LVPGC+KI GKAGMLDEIINYVQSLQ+Q+E
Subjt:  GDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE

Q93VJ4 Transcription factor BEE 21.2e-1484.44Show/hide
Query:  ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE
        ARREKIS++MK LQ++VPGCNK+ GKAGMLDEIINYVQSLQQQVE
Subjt:  ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE

Q9C670 Transcription factor bHLH761.2e-1438.96Show/hide
Query:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT
        RREKISERMK+LQ+LVPGC+K+ GKA MLDEIINYVQSLQ Q+E          LS  +  V P +  N  S   +  + SS+ T P      +N+S++ 
Subjt:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT

Query:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK
              +  G +Q       P +S  S LS     Q+  G E ++  L   +H+
Subjt:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK

Arabidopsis top hitse value%identityAlignment
AT1G26260.1 cryptochrome-interacting basic-helix-loop-helix 58.6e-1638.96Show/hide
Query:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT
        RREKISERMK+LQ+LVPGC+K+ GKA MLDEIINYVQSLQ Q+E          LS  +  V P +  N  S   +  + SS+ T P      +N+S++ 
Subjt:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT

Query:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK
              +  G +Q       P +S  S LS     Q+  G E ++  L   +H+
Subjt:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK

AT1G26260.2 cryptochrome-interacting basic-helix-loop-helix 58.6e-1638.96Show/hide
Query:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT
        RREKISERMK+LQ+LVPGC+K+ GKA MLDEIINYVQSLQ Q+E          LS  +  V P +  N  S   +  + SS+ T P      +N+S++ 
Subjt:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT

Query:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK
              +  G +Q       P +S  S LS     Q+  G E ++  L   +H+
Subjt:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK

AT1G26260.3 cryptochrome-interacting basic-helix-loop-helix 58.6e-1638.96Show/hide
Query:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT
        RREKISERMK+LQ+LVPGC+K+ GKA MLDEIINYVQSLQ Q+E          LS  +  V P +  N  S   +  + SS+ T P      +N+S++ 
Subjt:  RREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLIT

Query:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK
              +  G +Q       P +S  S LS     Q+  G E ++  L   +H+
Subjt:  HFELSSTWGGDLQRFEEGGPPLLSPSSFLS-----QQCSGIEDENETLFMDHHK

AT2G18300.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.6e-1682.22Show/hide
Query:  ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE
        ARREKIS++MKYLQ++VPGCNK+ GKAGMLDEIINYVQ LQ+QVE
Subjt:  ARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE

AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 12.3e-1647Show/hide
Query:  GDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE
        G  +S+  +   A + ++     + +   EL K +    + R  Q     S     RREKISERMK+LQ+LVPGC+KI GKAGMLDEIINYVQSLQ+Q+E
Subjt:  GDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTC---SPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGTCAGAGATGACGGTATCGGCTCGACTCAAACGACGGCGACCCCTCGGTGACTGTCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCGACCATTT
CGAGGATCTAGTTGCACCCAGAAGTTGGCCCGAGTTGGTCAAGTACGAGATCTCTTCTACGAAGTTTCGAACCAATCAGACGTGTTCGCCCCCCGTAGAGGCAAGGAGAG
AGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGCTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTC
CAGCAACAAGTTGAGAAATGCTTTAATTACTTAACTAAGATTAGGTTGTCAAATGGAATAGGTTATGTATTTCCAACGATAACGGCTAATTCTTCATCCTACTTTAATCA
ACTTGGAATGGGCTCAAGCTCTCAAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTTAATTACTCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTAC
AGAGGTTTGAAGAAGGAGGGCCGCCATTGTTGTCACCATCAAGCTTTTTATCGCAACAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTATGGACCACCACAAA
GTTGTTCCACTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTCCCCCCTAATTTCTTTCTTCTCTCTCACATTATTTATATATCTCTTCTCTTCTTTTTACTTTCATTCAACAACCAACAAAAACCACAAAACTACTCAACCCAAT
ATTAACTCTTTTGGGCTGCCGGCCGGAGACATGTTCAAGTCAGAGATGACGGTATCGGCTCGACTCAAACGACGGCGACCCCTCGGTGACTGTCGGAGCTTGTCTTCCGT
CTCGACTCCGGCAAGTCGGGTCGACCATTTCGAGGATCTAGTTGCACCCAGAAGTTGGCCCGAGTTGGTCAAGTACGAGATCTCTTCTACGAAGTTTCGAACCAATCAGA
CGTGTTCGCCCCCCGTAGAGGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGCTGTAACAAAATTGCTGGAAAAGCTGGAATGCTT
GATGAAATTATTAATTATGTTCAATCTCTCCAGCAACAAGTTGAGAAATGCTTTAATTACTTAACTAAGATTAGGTTGTCAAATGGAATAGGTTATGTATTTCCAACGAT
AACGGCTAATTCTTCATCCTACTTTAATCAACTTGGAATGGGCTCAAGCTCTCAAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTTAATTACTCATTTTG
AACTGTCTTCAACTTGGGGAGGTGATTTACAGAGGTTTGAAGAAGGAGGGCCGCCATTGTTGTCACCATCAAGCTTTTTATCGCAACAATGTTCAGGCATTGAAGATGAA
AATGAAACATTATTTATGGACCACCACAAAGTTGTTCCACTTTAATTTAACATTAAATTAATGTTATTGCAGATATATTATAATATATTCAAAATCCAACAAAATGTTTT
ATCATGAAAATTCACTAAAGTGTTGGCTGATGTTAGTAATTGATAAATTCAATTTTTATATGGATGGAATATTTGGTATTTTTCAATACCATATTCTTTTCCTTTTTTTT
TCATTGTAATTAAGTAGGGATATTAATAAATGGTTCTTAG
Protein sequenceShow/hide protein sequence
MFKSEMTVSARLKRRRPLGDCRSLSSVSTPASRVDHFEDLVAPRSWPELVKYEISSTKFRTNQTCSPPVEARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSL
QQQVEKCFNYLTKIRLSNGIGYVFPTITANSSSYFNQLGMGSSSQTVPQTPLINNNLSLITHFELSSTWGGDLQRFEEGGPPLLSPSSFLSQQCSGIEDENETLFMDHHK
VVPL