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Lsi10G003960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G003960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:6052980..6056061
RNA-Seq ExpressionLsi10G003960
SyntenyLsi10G003960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593682.1 hypothetical protein SDJN03_13158, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3885.42Show/hide
Query:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGE  H HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
XP_004150067.1 uncharacterized protein LOC101205849 [Cucumis sativus]2.8e-3986.17Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPH+PVRPIPSQLWCKNFGNKEY
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
XP_008460976.1 PREDICTED: uncharacterized protein LOC103499701 [Cucumis melo]8.2e-3984.04Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVLICIPIAMKSAELE           QRPH+P+RPIPSQLWCKNFGNKEY
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
XP_022964619.1 uncharacterized protein LOC111464577 [Cucurbita moschata]2.4e-3885.42Show/hide
Query:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGE  H HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
XP_038901804.1 uncharacterized protein LOC120088509 [Benincasa hispida]1.2e-4088.3Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
TrEMBL top hitse value%identityAlignment
A0A0A0LIT8 Uncharacterized protein1.4e-3986.17Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPH+PVRPIPSQLWCKNFGNKEY
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
A0A1S3CDP2 uncharacterized protein LOC1034997014.0e-3984.04Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVLICIPIAMKSAELE           QRPH+P+RPIPSQLWCKNFGNKEY
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
A0A6J1DR93 uncharacterized protein LOC1110231071.5e-3884.38Show/hide
Query:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGE  H HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVL+CIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
A0A6J1HNR7 uncharacterized protein LOC1114645771.2e-3885.42Show/hide
Query:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGE  H HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
A0A6J1KE86 uncharacterized protein LOC1114941971.2e-3885.42Show/hide
Query:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
        MGGGE  H HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE           QRPHNPVRPIPSQLWCKNFGNKEY
Subjt:  MGGGE--HVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00585.1 unknown protein7.2e-3367.74Show/hide
Query:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKE
        MGGG+H HG   GDFRAKVWSM+GGP CRPKHW+RNTAIAM G+ L+CIPIA  SA+LE           QRPH PVRPIPSQ+WCKNFG K+
Subjt:  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGGTGAACATGTACATGGGGAAGCCCATGGGGACTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATAC
CGCTATTGCTATGGCCGGCATCGTTCTCATCTGCATCCCTATCGCTATGAAATCTGCAGAGCTTGAGCGAGTAATCTCTGTCATCGCTTTTCCAATGCAGCAACGGCCAC
ACAATCCCGTTCGGCCGATTCCCTCGCAGCTCTGGTGCAAGAATTTTGGAAACAAGGAGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGGTGAACATGTACATGGGGAAGCCCATGGGGACTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATAC
CGCTATTGCTATGGCCGGCATCGTTCTCATCTGCATCCCTATCGCTATGAAATCTGCAGAGCTTGAGCGAGTAATCTCTGTCATCGCTTTTCCAATGCAGCAACGGCCAC
ACAATCCCGTTCGGCCGATTCCCTCGCAGCTCTGGTGCAAGAATTTTGGAAACAAGGAGTACTAA
Protein sequenceShow/hide protein sequence
MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELERVISVIAFPMQQRPHNPVRPIPSQLWCKNFGNKEY