CuGenDBv2

Gene ID	Lsi10G004130
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Squalene synthase
Genome location	chr10:6270730..6277329
RNA-Seq Expression	Lsi10G004130
Synteny	Lsi10G004130
Gene Ontology terms	GO:0008610 - lipid biosynthetic process (biological process) GO:0045338 - farnesyl diphosphate metabolic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004310 - farnesyl-diphosphate farnesyltransferase activity (molecular function) GO:0051996 - squalene synthase activity (molecular function)
InterPro domains	IPR002060 - Squalene/phytoene synthase IPR006449 - Squalene synthase-like IPR008949 - Isoprenoid synthase domain superfamily IPR019845 - Squalene/phytoene synthase, conserved site IPR033904 - Trans-isoprenyl diphosphate synthases, head-to-head IPR044844 - Trans-isoprenyl diphosphate synthases, eukaryotic-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ARE29887.1 squalene synthase [Cucumis sativus]

2.6e-193

84.38

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAKRLPANQS
Subjt:  IILAYLSAKRLPANQS

ARE29889.1 squalene synthase [Benincasa hispida var. chieh-qua]

1.3e-192

84.62

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTV    G+               
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------

Query:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
Subjt:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRIEAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLL 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAK+LPANQS
Subjt:  IILAYLSAKRLPANQS

KAA0045628.1 squalene synthase-like [Cucumis melo var. makuwa]

1.1e-194

83.69

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQSYTSFNRT
        IILAYLSAKRLPANQSY + NRT
Subjt:  IILAYLSAKRLPANQSYTSFNRT

XP_011649260.1 squalene synthase 12 [Cucumis sativus]

7.6e-193

84.13

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAKRLPANQS
Subjt:  IILAYLSAKRLPANQS

XP_038902127.1 squalene synthase 12-like [Benincasa hispida]

5.2e-194

84.86

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTV    G+               
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------

Query:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
Subjt:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRIEAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAK+LPANQS
Subjt:  IILAYLSAKRLPANQS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIW1 Squalene synthase

3.7e-193

84.13

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAKRLPANQS
Subjt:  IILAYLSAKRLPANQS

A0A1S3CD95 Squalene synthase

1.1e-192

84.13

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAKRLPANQS
Subjt:  IILAYLSAKRLPANQS

A0A2R2WEW0 Squalene synthase

1.3e-193

84.38

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAKRLPANQS
Subjt:  IILAYLSAKRLPANQS

A0A2R2WEW2 Squalene synthase

6.3e-193

84.62

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTV    G+               
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV----GM---------------

Query:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
Subjt:  -----------------------------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRIEAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLL 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQS
        IILAYLSAK+LPANQS
Subjt:  IILAYLSAKRLPANQS

A0A5A7TS05 Squalene synthase

5.1e-195

83.69

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHAA+LEDLAPDSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRIEAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQSYTSFNRT
        IILAYLSAKRLPANQSY + NRT
Subjt:  IILAYLSAKRLPANQSYTSFNRT

SwissProt top hits

e value

%identity

Alignment

A0A1P7Y0A8 Squalene synthase 12

5.3e-165

70.84

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHA+  EDLA DSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+EAIQ+ CK+SG L+KRK Y++ SE  +N A+I I+F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRLPANQ
        I+ AYLS+  LP  Q
Subjt:  IILAYLSAKRLPANQ

A0A1P7Y0D0 Squalene synthase 13

1.0e-163

71.05

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHA+  EDLA DSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+EAIQ+ CK+SG L+KRK Y++ SE  +N A+I I+F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRL
        I+ AYLS+  L
Subjt:  IILAYLSAKRL

C9E894 Squalene synthase 2

5.9e-164

72.37

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHA+  EDLA DSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIM+IGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSG-LLNKRKLYVVRSEPMYNPAVIVILFSLL
        YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYGAFFDFS MLK+KV+N+DPNA+KTLSR+EAIQ+ CK SG L  KRK Y++ +E  YN  +IVILF +L
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSG-LLNKRKLYVVRSEPMYNPAVIVILFSLL

Query:  CIILAYLSA
         I+ AYLS+
Subjt:  CIILAYLSA

D2K762 Squalene synthase 3

5.9e-164

72.13

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHA+  EDLA DSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSG-LLNKRKLYVVRSEPMYNPAVIVILFSLL
        YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYG FFDFS MLK+KV+N+DPNA+KTLSR+EAIQ+ CK SG L  KRK Y++ +E  YN  +I+ILF +L
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSG-LLNKRKLYVVRSEPMYNPAVIVILFSLL

Query:  CIILAYLSA
         I+ AYLS+
Subjt:  CIILAYLSA

O48666 Squalene synthase 1

2.2e-163

70.8

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLGAILKHP+DFYPLLKLK AARHAEKQIPPEPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS
                                           YQEAIEDIT RMGAGMAKFIC+EVET++DYDEYCHYVAGLVGLGLSKLFHA+  EDLA DSLSNS
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+EAIQ+ CK+SG L+KRK Y++ SE  +N A+I I+F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLC

Query:  IILAYLSAKRL
        I+ AYLS+  L
Subjt:  IILAYLSAKRL

Arabidopsis top hits

e value

%identity

Alignment

AT4G34640.1 squalene synthase 1

4.8e-153

67.8

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSLG +L++PDD YPLLK+K A   AEKQIPPEPHWGFCYSMLHKVSRSF+LVIQQL  ELRNAVC+FYLVLRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPD--SLS
                                           YQEAIE+IT+RMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLF AA  E L PD  ++S
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA
        NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLED KYEEN+ K+VQCLN++VTNAL H+EDCLKYM +LRD SIFRFCAIPQIMAIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSL
        LCYNN +VFRGVVK+RRGLTAKVIDRTKTMADVYGAF+DFS MLK KV+ +DPNASKTL+R+EA+Q+ C+ +G+L  RK Y V  +   N   I+++  L
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSL

Query:  LCIILAYLSA
        L I+ AYL A
Subjt:  LCIILAYLSA

AT4G34650.1 squalene synthase 2

2.9e-142

62.95

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Query:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------
        MGSL  IL+HPD+ YPLLKLK+A   A+KQIP EPH  FCYS+LHKVS+SF+LVIQQL  ELRNAVC+FYL+LRALDTV                     
Subjt:  MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTV---------------------

Query:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPD--SLS
                                           YQEAIEDITKRMGAGMAKFIC+EVET+DDYDEYCHY AGLVGLGLSK+F A++LE L PD   +S
Subjt:  ---------------------------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA
        NS GLFLQKTNII+DYLEDINE PKSRMFWPREIWGKY DKLEDFK EE + KAVQCLN++VTNALNHVEDCLK +++LRD +IF+ CAIPQI+AIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILF-S
        LCYNNV+VFRGVV++RRGL AKVIDRTKTM DVYGAF+DFS ML+ KV+N+DPNA KTL+R+E I++ CK++G L+KRK YV  ++   + A+ V++F  
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILF-S

Query:  LLCIILAYLSAKR
        LL I++ YL A +
Subjt:  LLCIILAYLSAKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTCTGAAACTGAAAATAGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTG
GGGATTTTGCTATAGCATGCTGCATAAGGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGTATATTTTATCTTGTTCTGC
GAGCCCTCGACACTGTTGGTATGTACCAGGAAGCGATTGAGGATATCACAAAACGGATGGGTGCAGGAATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGATGAT
TATGACGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAATTAGAGGACTTGGCACCTGATTCTCTTTCAAATTCTAT
GGGATTGTTTCTTCAGAAAACAAACATTATCCGGGATTACTTGGAGGACATTAATGAGATACCAAAGTCTCGGATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTG
ATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTGAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATG
TCTAACTTAAGGGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAACGTGGAAGTCTTCAGAGGGGTGGT
CAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACGAAAACGATGGCTGACGTCTATGGAGCTTTCTTCGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACA
ACAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAAAATGCAAGCAGTCGGGACTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAG
CCAATGTACAACCCAGCTGTGATTGTCATACTTTTCAGCCTATTATGCATCATTCTTGCTTATCTCTCTGCGAAACGGTTACCAGCCAATCAATCCTATACGAGTTTCAA
CCGAACACACCGCAAACGTGCACGGTATGATTCAGTTTCTGGCTCCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTAACTGTTTGTTTAGTAC
AGAGCAGGAAACAAGTGAAATCCTGTAACCTTCTAATGGATGTAGTGTAA

mRNA sequence

Show/hide mRNA sequence

AAATAAACAGCGAAAGGAAGAAGACGACTGAAAAGTGATTGTCATTTGAATTTGAGGCCTCAAAAAATTTCTTATTCAAAACGCCCCTTTGTTAATAATTCACCATTGAT
CAGAGAGGGCTCTCTGTCTACAAGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTCTTACCAATGTCTGATTACAGGAAGGATCTCAATAAACA
TTTTGATTTTGATTTTGCACAGCGATAAAATCAATAAACAACTAGCCAAACTCTTTTTTCAAACTTCCCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTCCACATATC
TGAAAACAACCCTTCATTCGATTTTCAGTCATTTGGGTTTGAATCATTCTTTTCTATTCGCTTTCTACTTTGGATTTCTCATCATCAACTGAAGAATAGGAATCCCATTT
GAGGAATTGGATATTTGTTCTGTGGGTTGACCGGCGAGAGATCTGAAGCTCTGTGGATTTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGAT
TTTTACCCGCTTCTGAAACTGAAAATAGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATAGCATGCTGCATAAGGTCTCAAGAAG
TTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGTATATTTTATCTTGTTCTGCGAGCCCTCGACACTGTTGGTATGTACCAGGAAGCGATTG
AGGATATCACAAAACGGATGGGTGCAGGAATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGATGATTATGACGAATATTGCCACTATGTAGCTGGACTTGTCGGA
CTAGGTTTATCTAAGCTGTTCCACGCTGCGAAATTAGAGGACTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGGGATTA
CTTGGAGGACATTAATGAGATACCAAAGTCTCGGATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTGA
AGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGGGATCTTTCCATTTTTCGATTTTGTGCA
ATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAACGTGGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCG
AACGAAAACGATGGCTGACGTCTATGGAGCTTTCTTCGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAACAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCG
AGGCAATACAGCAAAAATGCAAGCAGTCGGGACTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAACCCAGCTGTGATTGTCATACTTTTCAGC
CTATTATGCATCATTCTTGCTTATCTCTCTGCGAAACGGTTACCAGCCAATCAATCCTATACGAGTTTCAACCGAACACACCGCAAACGTGCACGGTATGATTCAGTTTC
TGGCTCCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTAACTGTTTGTTTAGTACAGAGCAGGAAACAAGTGAAATCCTGTAACCTTCTAATGG
ATGTAGTGTAATGGTTGACATGGAAATAAGCTTGTTGTTCATCTTTTTTTTCAATCTTCTAATAAGGGATTGAGTCTTGGAATTAAAATCTCTTCATATCAGTAAGTTAC
AATGAACAAATGGTATGCATCTCTTTCTGTTTCTA

Protein sequence

Show/hide protein sequence

MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVGMYQEAIEDITKRMGAGMAKFICQEVETVDD
YDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYM
SNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSE
PMYNPAVIVILFSLLCIILAYLSAKRLPANQSYTSFNRTHRKRARYDSVSGSIIFLRALFKYYNGCKLTVCLVQSRKQVKSCNLLMDVV

Lsi10G004130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome