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Lsi10G004170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:6316969..6321398
RNA-Seq ExpressionLsi10G004170
SyntenyLsi10G004170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150139.1 uncharacterized protein LOC101205057 [Cucumis sativus]2.7e-8095.51Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDGVQNQAPNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAE+SQAHIHNKTEDSP FPQPR+YKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

XP_008461016.1 PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo]1.5e-7894.23Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDES GVQNQAPN  SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVP YIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAE+SQAHIHNKTEDSP FPQPRNYKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

XP_023512006.1 uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo]2.4e-7691.03Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDG QN APNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTL+QVPNYIVGETELEASKEGRSL DFKYACVGYSV+LEKKDS +DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAEHSQAH+H+KTEDSP FPQPRNYKPSY AGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

XP_038900454.1 uncharacterized protein LOC120087673 isoform X1 [Benincasa hispida]6.7e-7994.27Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDGVQNQAPNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYIVGETELEASKEGRSL DFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTE-DSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAEHSQAH+HNKTE DSP FPQPR YKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTE-DSPVFPQPRNYKPSYPAGDEYLNR

XP_038900455.1 uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida]2.7e-8094.87Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDGVQNQAPNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYIVGETELEASKEGRSL DFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAEHSQAH+HNKTEDSP FPQPR YKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

TrEMBL top hitse value%identityAlignment
A0A0A0LIW6 Uncharacterized protein1.3e-8095.51Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDGVQNQAPNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAE+SQAHIHNKTEDSP FPQPR+YKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

A0A1S3CEZ6 uncharacterized protein LOC1034997217.2e-7994.23Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDES GVQNQAPN  SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVP YIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSS+DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAE+SQAHIHNKTEDSP FPQPRNYKPSYPAGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

A0A6J1CWC7 uncharacterized protein LOC1110153998.2e-7584.71Show/hide
Query:  MDESDGVQNQAPNLASN---GTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDD
        MDES+G+QNQ PNL+SN   G KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTL+QVPNY+VGETELEASKEGR+LTDFKYACVGYSVYLEKKDSSDD
Subjt:  MDESDGVQNQAPNLASN---GTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDD

Query:  VQNKQAELPFCVGLEVLLDKRPAEHSQA--HIHNKTEDSPVFPQPRNYKPSYPAGDEYLNRQELFDTLLS
        V NKQAELPFCVGLEVLLDKRPAEHS A  HIH+KTEDSP FPQPRNYKPSY AGDEYLNR +   TL++
Subjt:  VQNKQAELPFCVGLEVLLDKRPAEHSQA--HIHNKTEDSPVFPQPRNYKPSYPAGDEYLNRQELFDTLLS

A0A6J1FU95 uncharacterized protein LOC1114481921.3e-7589.74Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDG QN  PNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIG SKTL+QVPNYIVGETELEASKEGRSL DFKYACVGYSV+LEKKDS +DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAEHSQAH+H+KTEDSP FPQPRNYKPSY AGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

A0A6J1JH16 uncharacterized protein LOC1114843011.1e-7691.03Show/hide
Query:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN
        MDESDG QN APNL SNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTL+QVPNYIVGETELEASKEGRSL DFKYACVGYSV+LEKKDS +DVQN
Subjt:  MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR
        KQAELPFCVGLEVLLDKRPAEHSQAH+H+KTEDSP FPQPRNYKPSY AGDEYLNR
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51100.1 unknown protein5.9e-3348.97Show/hide
Query:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP
        V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL QVP+Y+VG++E EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP
Subjt:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP

Query:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS
         CVGLE+L D+R A  +     A + N+ +   V  PQ +N KP+
Subjt:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS

AT3G51100.2 unknown protein5.9e-3348.97Show/hide
Query:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP
        V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL QVP+Y+VG++E EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP
Subjt:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP

Query:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS
         CVGLE+L D+R A  +     A + N+ +   V  PQ +N KP+
Subjt:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS

AT3G51100.3 unknown protein7.0e-2644.83Show/hide
Query:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP
        V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL Q           EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP
Subjt:  VQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELP

Query:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS
         CVGLE+L D+R A  +     A + N+ +   V  PQ +N KP+
Subjt:  FCVGLEVLLDKRPAEHS----QAHIHNKTEDSPV-FPQPRNYKPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCAGACGGAGTTCAAAATCAAGCGCCTAATCTTGCCTCTAATGGGACTAAAGATTCCAAAGGCAAGTCTTGTAAGGGTTGTCTCTATTATTCTTCACTTCA
GAAATCCAAATCTAGAACACCCACTTGCATTGGATTGTCCAAAACTCTCGACCAAGTACCGAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCA
GTCTTACAGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGATTCATCAGATGATGTGCAGAACAAACAAGCTGAGCTCCCCTTCTGCGTTGGT
TTAGAGGTATTGTTGGACAAAAGACCAGCGGAACATTCCCAAGCTCATATTCATAATAAAACTGAAGATAGCCCTGTCTTTCCACAGCCACGTAACTATAAACCGTCGTA
TCCGGCTGGAGATGAGTATCTAAACAGGCAAGAACTTTTCGACACTCTTTTATCTTTTGAGCTTTCAATTTATTAG
mRNA sequenceShow/hide mRNA sequence
CTTGAATTTAATCTACTAAATACCGACTTAAAAAAAAGGAAAAAAAAACTGTCCATTAGAGTGATATTCCTGCAAGTTTTATAGCCTAGTATTTGCGAGAGAGAGAGAGA
GAGAGTTTGGGGACGAACCCTTTGCGCCTGTAATTGTATTGTATTTTATTAATGTTCATAGCCAGAAAAAGTCTTCAAGAACTTTGAGATGGATGAATCAGACGGAGTTC
AAAATCAAGCGCCTAATCTTGCCTCTAATGGGACTAAAGATTCCAAAGGCAAGTCTTGTAAGGGTTGTCTCTATTATTCTTCACTTCAGAAATCCAAATCTAGAACACCC
ACTTGCATTGGATTGTCCAAAACTCTCGACCAAGTACCGAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTACAGATTTCAAGTATGC
TTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGATTCATCAGATGATGTGCAGAACAAACAAGCTGAGCTCCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAA
GACCAGCGGAACATTCCCAAGCTCATATTCATAATAAAACTGAAGATAGCCCTGTCTTTCCACAGCCACGTAACTATAAACCGTCGTATCCGGCTGGAGATGAGTATCTA
AACAGGCAAGAACTTTTCGACACTCTTTTATCTTTTGAGCTTTCAATTTATTAGCAATATCAATGTCAGAGAAAATTTTAATACCAAAAATTGCAATGTGCAGGTTTAAA
CGAAACGCAGCCCTTGTCGC
Protein sequenceShow/hide protein sequence
MDESDGVQNQAPNLASNGTKDSKGKSCKGCLYYSSLQKSKSRTPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSDDVQNKQAELPFCVG
LEVLLDKRPAEHSQAHIHNKTEDSPVFPQPRNYKPSYPAGDEYLNRQELFDTLLSFELSIY