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Lsi10G004210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionComplex I-B22
Genome locationchr10:6373968..6375245
RNA-Seq ExpressionLsi10G004210
SyntenyLsi10G004210
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010888.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-3894.12Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]5.2e-3895.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTID+LIA GEAS+NKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]1.8e-3895.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

XP_022944758.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X2 [Cucurbita moschata]3.6e-3995.35Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIG
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]9.4e-4098.82Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTIDRLIADGEASYNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B222.5e-3895.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTID+LIA GEAS+NKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

A0A6J1FYY7 Complex I-B228.6e-3995.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

A0A6J1FYZ0 Complex I-B221.7e-3995.35Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIG
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG

A0A6J1J845 Complex I-B228.6e-3995.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

A0A6J1JEK9 Complex I-B221.7e-3995.35Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIG
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIG

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.2e-0632.94Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+  K+ +D+    +L+ + E  +   +HP PYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.7e-0532.94Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE  K+ +D+    +L+ + E  +   +HP PYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 97.8e-0531.76Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE  K+ +D+    +L+ + E  +   +HP PYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 96.2e-3481.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F   + VED+D ID+LIA GEA YNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 99.3e-0631.76Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RFE  K+ +D+    +L+ + E  + + +HP PYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein4.4e-3581.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F   + VED+D ID+LIA GEA YNKWRHPDPYI
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCCGTTCA
TCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCACAGAAACACGTGGAAGATCTTGACACAATAGACAGGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATTGGTAAGCACAGTCATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCCGTTCA
TCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCACAGAAACACGTGGAAGATCTTGACACAATAGACAGGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATTGGTAAGCACAGTCATGAATGA
Protein sequenceShow/hide protein sequence
MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIGKHSHE