; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR64
Genome locationchr10:6487662..6488366
RNA-Seq ExpressionLsi10G004270
SyntenyLsi10G004270
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045662.1 auxin-responsive protein SAUR64 [Cucumis melo var. makuwa]1.5e-6691.61Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA RAPPSDVPAGH+AVCVG+GCRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

KAE8651884.1 hypothetical protein Csa_006495 [Cucumis sativus]4.3e-6679.65Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APPSDVPAGH+AVCVG+GCRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLPFPLHTNKSDYTEATGPPLVRFGRRDG
        RVVA SELSNSSR SNLKDL RRCDEDVR   L                    S Y EATGPP VRFGRRDG
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLPFPLHTNKSDYTEATGPPLVRFGRRDG

XP_004147056.1 auxin-induced protein X10A [Cucumis sativus]3.0e-6793.01Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APPSDVPAGH+AVCVG+GCRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVA SELSNSSR SNLKDL RRCDEDVR KNLEFLGESRPLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

XP_008457620.1 PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]1.5e-6691.61Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA RAPPSDVPAGH+AVCVG+GCRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

XP_038902037.1 auxin-responsive protein SAUR71-like [Benincasa hispida]4.5e-7197.9Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS +TSKS+KIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

TrEMBL top hitse value%identityAlignment
A0A0A0LM48 Uncharacterized protein1.5e-6793.01Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APPSDVPAGH+AVCVG+GCRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVA SELSNSSR SNLKDL RRCDEDVR KNLEFLGESRPLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A1S3C5H3 auxin-responsive protein SAUR647.2e-6791.61Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA RAPPSDVPAGH+AVCVG+GCRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A5A7TQK8 Auxin-responsive protein SAUR647.2e-6791.61Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA RAPPSDVPAGH+AVCVG+GCRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RVVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A6J1FXH8 auxin-responsive protein SAUR50-like2.7e-6186.71Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS   +KS+KIR IVRLRQMLQHWRKKARAAA RAPP DVPA HVAVCVGSGCRRFIVRA+FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RV+ARSEL+NSSR+S+LKDLQRRCD+DVR KNLE+LGESRPLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A6J1JBR0 auxin-responsive protein SAUR50-like4.5e-6186.01Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS   +KS+KIR IVRLRQMLQHWRKKARAAA RAPP DVPA HVAVCVGSGCRRFIVRA+FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        RV+ARSEL+NSSR+S++KDLQRRCD+DVR KNLE+LGESRPLL
Subjt:  RVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR403.2e-1149.21Show/hide
Query:  SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        S VP+GHV V VG    RF+V A  LNHP+F  LL+++ +EYG+  +G L +PC+  VFE+V+
Subjt:  SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

O65695 Auxin-responsive protein SAUR507.1e-1138.61Show/hide
Query:  KSHKIRRIVRLRQMLQHWRK--KARAAAYRAP--PSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRV
        K+ K+ +   L+Q+L+      K     Y     P DVP GH  V VG    R+IV  +FL HP F+ LL +AEEE+GF+    L +PCDE VF+ +  +
Subjt:  KSHKIRRIVRLRQMLQHWRK--KARAAAYRAP--PSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRV

Query:  V
        +
Subjt:  V

Q9LTV3 Auxin-responsive protein SAUR721.4e-1149.21Show/hide
Query:  SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        S VP GHV V VG    RF+V A  LNHP+F  LL+++ +EYG+E +G L +PC   VFE ++
Subjt:  SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Q9SA49 Auxin-responsive protein SAUR419.2e-1134.11Show/hide
Query:  HKIRRIVR---------LRQMLQHWRKKARAAAYRAPP-----------SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLA
        H IRR+ R         +R+    +R +       APP           + VPAGHV V VG    RF+V A  +NHPIF  LL+++ +EYG+  +G L 
Subjt:  HKIRRIVR---------LRQMLQHWRKKARAAAYRAPP-----------SDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLA

Query:  LPCDESVFEEVLRVVARSELSNSSRNSNL
        +PC   VFE V+  +       S    NL
Subjt:  LPCDESVFEEVLRVVARSELSNSSRNSNL

Q9SGU2 Auxin-responsive protein SAUR712.4e-1141.49Show/hide
Query:  IRRIVRLRQMLQHWRKKARAAAYRAP----PSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        IRR+ R+    Q+   ++ +   R       S VP GHV V VG    RF+V A  LNHP+F  LL Q+ +EYG+E +G L +PC   VFE +L
Subjt:  IRRIVRLRQMLQHWRKKARAAAYRAP----PSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family1.1e-4059.31Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV
        M+    K  KIR IVRLRQML+ WR KAR ++  R  PSDVP+GHVAVCVGSGCRRF+VRA++LNHPI   LL QAEEE+GF  +GPL +PC+ESVFEE 
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV

Query:  LRVVARSELSNSSRNSNLKDLQRRCDEDVRIKN-LEFLGESRPLL
        +R ++RS+ S SSR +   DLQ +C+  ++IK+ L+ + ESRPLL
Subjt:  LRVVARSELSNSSRNSNLKDLQRRCDEDVRIKN-LEFLGESRPLL

AT1G75590.1 SAUR-like auxin-responsive protein family2.9e-3654.48Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA--YRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEE
        M+    K  KIR IVRLRQML+ WR +AR ++   R  PSDVP+GHVAV VGS CRRF+VRAT+LNHP+ R LL QAEEE+GF  +GPL +PC+ESVFEE
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA--YRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEE

Query:  VLRVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
         +R ++RS+ + S R +   D Q+ C        L+   ESRPLL
Subjt:  VLRVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

AT4G34750.1 SAUR-like auxin-responsive protein family1.5e-3254.55Show/hide
Query:  KSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAR
        K++KI  +VR+RQML+ W+KKA   ++   P SDVP GHVAV VG   RR++VRA  LNHPIFR+LL++AEEEYGF   GPLA+PCDES+FE+++ +V R
Subjt:  KSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAR

Query:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL
         E S+SS   N     L+DL RRC      KN     ESRPLL
Subjt:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL

AT4G34750.2 SAUR-like auxin-responsive protein family1.5e-3254.55Show/hide
Query:  KSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAR
        K++KI  +VR+RQML+ W+KKA   ++   P SDVP GHVAV VG   RR++VRA  LNHPIFR+LL++AEEEYGF   GPLA+PCDES+FE+++ +V R
Subjt:  KSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAR

Query:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL
         E S+SS   N     L+DL RRC      KN     ESRPLL
Subjt:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL

AT5G10990.1 SAUR-like auxin-responsive protein family1.8e-3354.17Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV
        M+    K  KIR IV+LRQML+ WR KAR ++  R+ PSDVP+GHVAV VG  CRRF+V AT+LNHPI   LL +AEEE+GF  +GPL +PC+ESVFEE 
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV

Query:  LRVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +R + R     SSR +   DL++     +R K L+ L ESRPLL
Subjt:  LRVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGGAGACGTCGAAAAGCCACAAGATCCGTCGCATTGTCCGCCTTCGTCAAATGCTACAACACTGGCGGAAGAAGGCACGTGCAGCGGCCTACAGAGCACCACC
ATCCGACGTTCCCGCCGGTCACGTCGCCGTCTGCGTCGGCAGCGGCTGCCGGCGATTCATCGTCCGCGCGACCTTCCTGAACCACCCGATCTTCCGTAAGTTACTCTCAC
AAGCTGAAGAAGAGTACGGCTTCGAAACGCGAGGTCCTCTGGCTCTTCCGTGCGACGAATCGGTTTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGAGTTGAGTAAC
TCATCGCGAAATTCGAATCTCAAGGATTTACAAAGGCGATGCGATGAAGATGTCAGGATTAAGAACCTCGAGTTCTTAGGCGAATCCAGACCTTTACTACTTCTTCCTTT
TCCTTTACATACTAACAAATCGGACTATACTGAAGCTACGGGTCCTCCTCTGGTCAGATTTGGCCGGAGAGACGGCCGGACGGCCATTAACGGTTGCTTTAACGAGCCAG
TCGGCGTGGAATCGGAGGTTTTTTCGTTTTTTCTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCGGAGACGTCGAAAAGCCACAAGATCCGTCGCATTGTCCGCCTTCGTCAAATGCTACAACACTGGCGGAAGAAGGCACGTGCAGCGGCCTACAGAGCACCACC
ATCCGACGTTCCCGCCGGTCACGTCGCCGTCTGCGTCGGCAGCGGCTGCCGGCGATTCATCGTCCGCGCGACCTTCCTGAACCACCCGATCTTCCGTAAGTTACTCTCAC
AAGCTGAAGAAGAGTACGGCTTCGAAACGCGAGGTCCTCTGGCTCTTCCGTGCGACGAATCGGTTTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGAGTTGAGTAAC
TCATCGCGAAATTCGAATCTCAAGGATTTACAAAGGCGATGCGATGAAGATGTCAGGATTAAGAACCTCGAGTTCTTAGGCGAATCCAGACCTTTACTACTTCTTCCTTT
TCCTTTACATACTAACAAATCGGACTATACTGAAGCTACGGGTCCTCCTCTGGTCAGATTTGGCCGGAGAGACGGCCGGACGGCCATTAACGGTTGCTTTAACGAGCCAG
TCGGCGTGGAATCGGAGGTTTTTTCGTTTTTTCTTTTATAG
Protein sequenceShow/hide protein sequence
MSPETSKSHKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSN
SSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLPFPLHTNKSDYTEATGPPLVRFGRRDGRTAINGCFNEPVGVESEVFSFFLL