; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationchr10:6515400..6515732
RNA-Seq ExpressionLsi10G004280
SyntenyLsi10G004280
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147005.1 auxin-responsive protein SAUR50 [Cucumis sativus]8.4e-5193.64Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILK NKLPQ TVLKQILKRCSSLGKKSNN  AYDAD++LPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

XP_008457621.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]3.4e-5294.55Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKKSNN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

XP_022943433.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]2.2e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN+ AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

XP_022947563.1 auxin-responsive protein SAUR50 [Cucurbita moschata]1.3e-4890.91Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K NKLPQPTVLKQILKRCSSLGKK+NN   YD D+DLP+DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

XP_038900691.1 auxin-responsive protein SAUR50 [Benincasa hispida]3.6e-5496.36Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKKS+N+ AYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ77 Uncharacterized protein4.1e-5193.64Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILK NKLPQ TVLKQILKRCSSLGKKSNN  AYDAD++LPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

A0A1S3C616 auxin-induced protein 15A1.7e-5294.55Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKKSNN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

A0A5D3BIH0 Auxin-induced protein 15A1.7e-5294.55Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKKSNN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

A0A6J1FWX1 auxin-responsive protein SAUR50-like1.1e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN+ AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

A0A6J1J850 auxin-responsive protein SAUR50-like1.1e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN+ AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLTSSMLR
Subjt:  FKSLTSSMLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.5e-3775.7Show/hide
Query:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        MAI+ K +KL Q  +LKQILKRCSSLGKK  N   YD +D LPLDVPKGHF VYVGENRSR+IVPISFLTHPEFQ LL++AEEEFGFDH MGLTIPC E 
Subjt:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFKSLTS
        VF++LTS
Subjt:  VFKSLTS

P0DKL1 Auxin-responsive protein SAUR508.2e-2555.77Show/hide
Query:  ILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFK
        I K +K  Q   +K+I+K+CSS GK ++       D  LP DVPKGHF VYVGE R+R+IVPIS L HP FQ LL+++EEEFGF+H MG+ IPCQE  F 
Subjt:  ILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFK

Query:  SLTS
        S  S
Subjt:  SLTS

P32295 Indole-3-acetic acid-induced protein ARG74.4e-1862.69Show/hide
Query:  LDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFKSLTSSM
        LD PKG+ AVYVGEN  RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E +F+ +TS +
Subjt:  LDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFKSLTSSM

P33081 Auxin-induced protein 15A7.5e-1862.12Show/hide
Query:  DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFKSLTSSM
        D PKG+ AVYVGE   RF++P+S+L  P FQ LL QAEEEFG+DH M GLTIPC E VF+ +TS +
Subjt:  DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFKSLTSSM

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.0e-3065.14Show/hide
Query:  MAILKVNKL--PQPTVLKQILKRCSSLGKKSN-NSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ
        MAI + +K    Q   +KQI+KRCSSL K  N N   Y+ +DDLP DVPKGHF VYVG NRSR+IVPIS+L H EFQ LLR AEEEFGFDH MGLTIPC 
Subjt:  MAILKVNKL--PQPTVLKQILKRCSSLGKKSN-NSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ

Query:  EHVFKSLTS
        E  F+SL S
Subjt:  EHVFKSLTS

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family8.7e-3868.14Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSN---NSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ
        MAI+  +KL Q T++KQILKRCSSLGKK +   N T     D LPLDVPKGHF VYVG NR R+++PISFLT PEFQ LL+QAEEEFGFDH MGLTIPC+
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSN---NSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ

Query:  EHVFKSLTSSMLR
        E  FKSL +SML+
Subjt:  EHVFKSLTSSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family1.9e-3770.91Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA+ K NKL Q  ++KQILKRCSSLGKK +N    D ++  PL+VPKGHF VYVGENR R++VPISFLT PEFQ LL+QAEEEFGFDH MGLTIPC+E V
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTSSMLR
        F+SLT SMLR
Subjt:  FKSLTSSMLR

AT2G16580.1 SAUR-like auxin-responsive protein family4.0e-3571.03Show/hide
Query:  MAILKVN-KLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        M+ILK + KL Q  +L+QILKRCSSLGKK N    Y+ + DLPLDVPKGHF VYVG NRSR+IVPISFLT+ +FQCLLR+AEEEFGFDH MGLTIPC E 
Subjt:  MAILKVN-KLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFKSLTS
         F+ LTS
Subjt:  VFKSLTS

AT2G21220.1 SAUR-like auxin-responsive protein family3.1e-3568.87Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA+ + +KL Q  +LKQILKRCSSL K    +  YD +D LP+DVPKGHF VYVGE RSR+IVPISFLTHP+F+ LL+QAEEEFGF+H MGLTIPC+E V
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FKSLTS
        F+SLTS
Subjt:  FKSLTS

AT4G34760.1 SAUR-like auxin-responsive protein family3.9e-3875.7Show/hide
Query:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        MAI+ K +KL Q  +LKQILKRCSSLGKK  N   YD +D LPLDVPKGHF VYVGENRSR+IVPISFLTHPEFQ LL++AEEEFGFDH MGLTIPC E 
Subjt:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFKSLTS
        VF++LTS
Subjt:  VFKSLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCTAAAGGTAAACAAACTCCCACAACCTACCGTCCTCAAACAAATCCTCAAACGTTGCTCTAGCCTTGGTAAAAAGTCCAACAACAGCACTGCCTACGACGC
CGACGACGACCTCCCTCTCGACGTCCCCAAGGGCCACTTCGCCGTCTACGTCGGTGAAAACCGAAGCCGTTTCATCGTTCCGATCTCGTTCTTAACCCACCCGGAATTCC
AATGCTTACTTCGTCAAGCAGAAGAAGAATTTGGATTTGATCATTACATGGGTCTCACCATCCCTTGTCAAGAACATGTCTTCAAATCCTTAACCTCCTCCATGCTTAGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCTAAAGGTAAACAAACTCCCACAACCTACCGTCCTCAAACAAATCCTCAAACGTTGCTCTAGCCTTGGTAAAAAGTCCAACAACAGCACTGCCTACGACGC
CGACGACGACCTCCCTCTCGACGTCCCCAAGGGCCACTTCGCCGTCTACGTCGGTGAAAACCGAAGCCGTTTCATCGTTCCGATCTCGTTCTTAACCCACCCGGAATTCC
AATGCTTACTTCGTCAAGCAGAAGAAGAATTTGGATTTGATCATTACATGGGTCTCACCATCCCTTGTCAAGAACATGTCTTCAAATCCTTAACCTCCTCCATGCTTAGA
TGA
Protein sequenceShow/hide protein sequence
MAILKVNKLPQPTVLKQILKRCSSLGKKSNNSTAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFKSLTSSMLR