; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:6529450..6530365
RNA-Seq ExpressionLsi10G004290
SyntenyLsi10G004290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035050.1 hypothetical protein SDJN02_01844, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0568.89Show/hide
Query:  AGFIFSTPTKPVIFTATSHMGLTSASQTARVEMFVSGFGHFIEQL
        AG+IFS P KPVI T TSHM LTSASQTAR+EM VS    F++QL
Subjt:  AGFIFSTPTKPVIFTATSHMGLTSASQTARVEMFVSGFGHFIEQL
XP_022947567.1 uncharacterized protein LOC111451392 isoform X1 [Cucurbita moschata]4.1e-1080.49Show/hide
Query:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
        MLQNTHD SQTF QYM FN DGTL P FWFGPACA MFI+T
Subjt:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
XP_022947568.1 uncharacterized protein LOC111451392 isoform X2 [Cucurbita moschata]4.1e-1080.49Show/hide
Query:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
        MLQNTHD SQTF QYM FN DGTL P FWFGPACA MFI+T
Subjt:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
TrEMBL top hitse value%identityAlignment
A0A6J1G6T6 uncharacterized protein LOC111451392 isoform X12.0e-1080.49Show/hide
Query:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
        MLQNTHD SQTF QYM FN DGTL P FWFGPACA MFI+T
Subjt:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
A0A6J1G6Y9 uncharacterized protein LOC111451392 isoform X22.0e-1080.49Show/hide
Query:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
        MLQNTHD SQTF QYM FN DGTL P FWFGPACA MFI+T
Subjt:  MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGAATACACATGATCATTCACAGACCTTTCAACAGTACATGACATTTAATGAGGATGGGACCCTACGGCCCTGCTTTTGGTTTGGACCTGCATGTGCAGTCAT
GTTCATCATCACAACTAAACTCCCAACCAGAAAACTAAAGCGGCGGCCTGCTGCTGGCTTCATTTTCAGCACGCCTACGAAACCGGTCATCTTTACAGCAACATCCCACA
TGGGGTTAACCTCTGCTAGCCAGACTGCCAGAGTCGAAATGTTTGTTTCCGGGTTTGGGCATTTCATTGAGCAGCTGGGATGCAATATTGTAAGTATAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAGAATACACATGATCATTCACAGACCTTTCAACAGTACATGACATTTAATGAGGATGGGACCCTACGGCCCTGCTTTTGGTTTGGACCTGCATGTGCAGTCAT
GTTCATCATCACAACTAAACTCCCAACCAGAAAACTAAAGCGGCGGCCTGCTGCTGGCTTCATTTTCAGCACGCCTACGAAACCGGTCATCTTTACAGCAACATCCCACA
TGGGGTTAACCTCTGCTAGCCAGACTGCCAGAGTCGAAATGTTTGTTTCCGGGTTTGGGCATTTCATTGAGCAGCTGGGATGCAATATTGTAAGTATAGGTTAAAAGTTA
GATTAGAAGTAGCAAGGCAGGAGGGAAGGCAATGAAAGGAAAAATGGTTACAGTTATGGTAAAGTAAAAGTGGCAGTTTTGAAGTAGTTGGGTTTGATCTGCCTTACTAT
GTTGTCTTCTTCACAAGAAGACTTGGGGACAAGAGTAACATGGCCTTCCATGTGCCAAACACAAGGAATAGTCTCTATCAAACTCTCAAAAGAATATCCCTTTTACCCCA
TTGGACCCTTTGCCTTTCACTCTCTCCGTGCCTGTGATTTTTCTTCTGTTTTTTCCACCATTCAAAATAAATTTTTTTTTTTCATCTAACATG
Protein sequenceShow/hide protein sequence
MLQNTHDHSQTFQQYMTFNEDGTLRPCFWFGPACAVMFIITTKLPTRKLKRRPAAGFIFSTPTKPVIFTATSHMGLTSASQTARVEMFVSGFGHFIEQLGCNIVSIG