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Lsi10G004340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein SAUR21-like
Genome locationchr10:6546370..6546657
RNA-Seq ExpressionLsi10G004340
SyntenyLsi10G004340
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045666.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]2.2e-3984.21Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFRF KIVN VHN+GLS LAT+QE  IVRKGYCAVYVGESQRKRFVIPI+YLN+PFFKDLL + EEEFGYNHPMGGLTIPCSDDTF  LIS LH
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

KAG6605033.1 hypothetical protein SDJN03_02350, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3681.05Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR  KIVN V NLGLS LAT+Q   +VRKGYCAVYVGESQR RFVIPIAYLN+PFFKDLLS+ EEEFGYNHPMGGLTIPCSDD FIDL+S L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

KGN61867.1 hypothetical protein Csa_005975 [Cucumis sativus]1.2e-4087.37Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKDLL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]4.3e-3576.84Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR  ++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIPIAYLN PFFKDLLSQV EEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]1.7e-3677.89Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR A++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIP+AYLN PFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein7.9e-3574.74Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR  ++VNV+ N+ LS L T+  S  +RKGYCAVYVGE+Q+KRFVIPIAYLN PFFKDLLSQV EEFGYNHPMGGLTIPCS+DTF+DLIS+L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

A0A0A0LM55 Uncharacterized protein5.6e-4187.37Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKDLL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

A0A1S3C683 auxin-responsive protein SAUR21-like2.1e-3576.84Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR  ++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIPIAYLN PFFKDLLSQV EEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

A0A5A7TU59 Auxin-responsive protein SAUR21-like1.1e-3984.21Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFRF KIVN VHN+GLS LAT+QE  IVRKGYCAVYVGESQRKRFVIPI+YLN+PFFKDLL + EEEFGYNHPMGGLTIPCSDDTF  LIS LH
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

A0A5D3BN78 Auxin-responsive protein SAUR21-like2.1e-3576.84Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR  ++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIPIAYLN PFFKDLLSQV EEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B4.8e-2154.74Show/hide
Query:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        MGFR   I         S    + ++  V KGY AVYVGE  R RFVIP++YLN+P F+DLLSQ EEEFGY+HP GGLTIPCS+D F  + S L+
Subjt:  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

Q9FJF6 Auxin-responsive protein SAUR234.3e-2266.15Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+LH
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

Q9FJF9 Auxin-responsive protein SAUR213.7e-2153.75Show/hide
Query:  LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL
        LG   + +   +    KG+ AVYVGESQ+KR+++P++YL++P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+L
Subjt:  LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL

Q9FJG0 Auxin-responsive protein SAUR208.1e-2166.67Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQ
        KG+ AVYVGESQ+KR+++PI+YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQ

Q9FK62 Auxin-responsive protein SAUR243.7e-2165.62Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL
        KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+L
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL

Arabidopsis top hitse value%identityAlignment
AT3G03850.1 SAUR-like auxin-responsive protein family2.0e-2260.49Show/hide
Query:  LGLSYLATNQESPIVRKGYCAVYVGESQRK-RFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL
        LG S + T++  P   KG+ AVYVGESQ+K R  +P++YLN+P F+DLLS+ EEEFG++HPMGGLTIPC  DTFI + SQL
Subjt:  LGLSYLATNQESPIVRKGYCAVYVGESQRK-RFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL

AT4G38825.1 SAUR-like auxin-responsive protein family1.5e-2266.15Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        KG+ AVYVGESQ KR+++P++YLN+P F+ LLS+ E+EFG++HPMGGLTIPC  DTFI + SQLH
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

AT4G38840.1 SAUR-like auxin-responsive protein family1.2e-2258.67Show/hide
Query:  ATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        +++  S  V KGY AVYVGE   KRFV+P++YL++P F+DLL + EEEFG++HPMGGLTIPCS++ FIDL S+ +
Subjt:  ATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

AT5G18060.1 SAUR-like auxin-responsive protein family3.1e-2366.15Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH
        KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+LH
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

AT5G18080.1 SAUR-like auxin-responsive protein family2.6e-2265.62Show/hide
Query:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL
        KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++ S+L
Subjt:  KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTA
TGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACC
CCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTA
TGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACC
CCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG
Protein sequenceShow/hide protein sequence
MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH