; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6566149..6566436
RNA-Seq ExpressionLsi10G004360
SyntenyLsi10G004360
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605030.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4491.58Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQ+LKM+N  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

KGN61870.1 hypothetical protein Csa_006697 [Cucumis sativus]1.1e-4696.84Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILKM+NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

XP_008457628.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.6e-4594.74Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILK++NQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

XP_022146159.1 auxin-responsive protein SAUR20-like [Momordica charantia]2.5e-4389Show/hide
Query:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILKM     +NQ NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

XP_038901507.1 auxin-responsive protein SAUR21-like [Benincasa hispida]3.7e-4798.95Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ S
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

TrEMBL top hitse value%identityAlignment
A0A0A0LIY9 Uncharacterized protein5.3e-4796.84Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILKM+NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

A0A1S3C621 auxin-responsive protein SAUR21-like7.6e-4694.74Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILK++NQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

A0A5A7TS40 Auxin-responsive protein SAUR21-like7.6e-4694.74Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILK++NQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

A0A6J1CWI9 auxin-responsive protein SAUR21-like1.8e-3479Show/hide
Query:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRL  SL+ HAKQILKM     KNQ +VP+ H+AVYVGE  IQRKRFVVPIS+LNHPSF+QLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSR Q S
Subjt:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

A0A6J1CXB8 auxin-responsive protein SAUR20-like1.2e-4389Show/hide
Query:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        MGIRLPSSLIHHAKQILKM     +NQ NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRFQHS
Subjt:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

SwissProt top hitse value%identityAlignment
Q41220 Auxin-responsive protein SAUR154.3e-2259.26Show/hide
Query:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AKQI++ +  S+ PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS +EEEFG+ HP GGLTIPC E  F  +TS+ Q
Subjt:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ

Q9FJF7 Auxin-responsive protein SAUR221.1e-2057.83Show/hide
Query:  AKQILKMKNQ--SNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AK+IL       S  P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS +E+EFGF HP GGLTIPC ED F+++TSR Q
Subjt:  AKQILKMKNQ--SNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ

Q9FJF9 Auxin-responsive protein SAUR215.6e-2259.26Show/hide
Query:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AK+IL     S  P+G +AVYVGE   Q+KR++VP+S+L+ PSF+ LLS +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ

Q9FJG0 Auxin-responsive protein SAUR205.6e-2261.45Show/hide
Query:  AKQILKMKN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AK+IL       S  P+G +AVYVGE   Q+KR++VPIS+LN PSF+ LLS +EEEFGF HP GGLTIPC ED F+++TSRFQ
Subjt:  AKQILKMKN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ

Q9FK62 Auxin-responsive protein SAUR244.8e-2159.04Show/hide
Query:  AKQILKMKN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AK+IL       S  P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  AKQILKMKN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family7.3e-2553.54Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSN----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS
        M IR+ S ++  +KQ+LK  + S+    +P+GH+AVYVGE+ +Q++RFVVP+++L+HP F++LL  AEEEFGF HP GGLTIPC E  F+DL SR   S
Subjt:  MGIRLPSSLIHHAKQILKMKNQSN----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS

AT4G34800.1 SAUR-like auxin-responsive protein family6.6e-2661.96Show/hide
Query:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRF
        M IRL  S + ++KQ    K QS VP+GH+AVYVGE    +KRFVVPIS+LNHPSF+ LLS AEEEFGF+HP GGLTIPC+E+ FV L + +
Subjt:  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRF

AT4G34810.1 SAUR-like auxin-responsive protein family6.0e-2762.37Show/hide
Query:  KQILKMKNQSN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-TSRFQ
        KQILK+ + +N           VP+GH+AVYVGE I++++KRFVVPISFLNHPSFK+ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SR Q
Subjt:  KQILKMKNQSN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-TSRFQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.1e-2352.48Show/hide
Query:  MGIRLPSSLIHHAKQILKM---------KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSR
        M IR+P  ++  +KQIL+           +  +VP+G++AVYVGE ++  KRFVVP+S+L+ PSF+ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Subjt:  MGIRLPSSLIHHAKQILKM---------KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSR

Query:  F
        F
Subjt:  F

AT4G38850.1 SAUR-like auxin-responsive protein family3.1e-2359.26Show/hide
Query:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ
        AKQI++ +  S+ PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS +EEEFG+ HP GGLTIPC E  F  +TS+ Q
Subjt:  AKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTTTGCCATCGTCTTTGATTCATCATGCCAAGCAAATTCTAAAGATGAAAAACCAGTCAAATGTACCTAGAGGACATATTGCTGTCTATGTGGGCGAGAT
CGATATTCAAAGGAAGCGTTTTGTGGTTCCGATATCTTTCCTAAACCATCCTTCATTTAAACAACTTCTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATCCCCAAG
GAGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTAGATCTTACTTCTAGATTTCAACACTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTTTGCCATCGTCTTTGATTCATCATGCCAAGCAAATTCTAAAGATGAAAAACCAGTCAAATGTACCTAGAGGACATATTGCTGTCTATGTGGGCGAGAT
CGATATTCAAAGGAAGCGTTTTGTGGTTCCGATATCTTTCCTAAACCATCCTTCATTTAAACAACTTCTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATCCCCAAG
GAGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTAGATCTTACTTCTAGATTTCAACACTCCTAG
Protein sequenceShow/hide protein sequence
MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQHS