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Lsi10G004380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6579118..6579414
RNA-Seq ExpressionLsi10G004380
SyntenyLsi10G004380
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61931.2 hypothetical protein Csa_006339 [Cucumis sativus]2.5e-3882.65Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV+LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

XP_022944360.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.2e-4087.76Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI L S+LLG AKQILK QSVS  CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFVDLL RAEEEFGFS P GGLTIPCKEEAFID+TSRLHTS
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

XP_022986727.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]1.6e-4087.76Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFVDLL RAEEEFGFS P GGL IPCKEEAFID+TSRLHTS
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

XP_023512608.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]6.0e-4087.76Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHP FVDLL RAEEEFGFS PIGGLTIPCKEEAFI +TSRLHTS
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

XP_038901506.1 auxin-responsive protein SAUR21-like [Benincasa hispida]5.4e-4185.71Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI  PSVLLG AKQILK QSVS++CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSF+DLL RAEEEFGFSHP G LTIPCKEEAFID+TS LH S
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

TrEMBL top hitse value%identityAlignment
A0A0A0LLF7 Uncharacterized protein3.5e-3882.65Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI  PSVLL  AKQILK +SVS RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV+LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

A0A0A0LM65 Uncharacterized protein6.0e-3881.63Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV+LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

A0A5A7TWB4 Auxin-responsive protein SAUR21-like1.0e-3781.63Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

A0A6J1FYM0 auxin-responsive protein SAUR21-like5.8e-4187.76Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI L S+LLG AKQILK QSVS  CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFVDLL RAEEEFGFS P GGLTIPCKEEAFID+TSRLHTS
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

A0A6J1J8D4 auxin-responsive protein SAUR21-like7.6e-4187.76Show/hide
Query:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFVDLL RAEEEFGFS P GGL IPCKEEAFID+TSRLHTS
Subjt:  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR235.3e-2357.65Show/hide
Query:  VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH
        VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFGF HP+GGLTIPC E+ FI++TSRLH
Subjt:  VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH

Q9FJF9 Auxin-responsive protein SAUR213.4e-2257.47Show/hide
Query:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL
        LLG AK+IL + + S+      PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EEEFGF HP+GGLTIPC E+ FI++TSRL
Subjt:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL

Q9FJG0 Auxin-responsive protein SAUR207.6e-2258.14Show/hide
Query:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSR
        LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VPISYL+ PSF  LL ++EEEFGF HP+GGLTIPC E+ FI++TSR
Subjt:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSR

Q9FJG1 Auxin-responsive protein SAUR192.0e-2258.62Show/hide
Query:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL
        LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EEEFGF+HP+GGLTIPC E+ FI++TSRL
Subjt:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL

Q9FK62 Auxin-responsive protein SAUR245.8e-2257.47Show/hide
Query:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL
        LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFGF HP+GGLTIPC E+ FI++TSRL
Subjt:  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.8e-2558.06Show/hide
Query:  SVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGK-TERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
        S +L  +KQ+LK  S SS     +PKGH+ VYVG+  +++RF VP++YLSHP F  LL++AEEEFGF HP+GGLTIPC E+ FID+ SRL TS
Subjt:  SVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGK-TERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

AT4G34800.1 SAUR-like auxin-responsive protein family1.4e-2367.61Show/hide
Query:  SSRCQSNVPKGHIPVYVGK--TERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDI
        S + QS VPKGH+ VYVG+    +KRF VPISYL+HPSF  LL RAEEEFGF+HPIGGLTIPC+EE F+ +
Subjt:  SSRCQSNVPKGHIPVYVGK--TERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDI

AT4G34810.1 SAUR-like auxin-responsive protein family1.3e-2460.87Show/hide
Query:  KQILKKQSV------SSRCQSNVPKGHIPVYVG---KTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFID-ITSRL
        KQILK  S+      SS    +VPKGH+ VYVG   + E+KRF VPIS+L+HPSF + L RAEEEFGF+HP+GGLTIPC+EE F+D I SRL
Subjt:  KQILKKQSV------SSRCQSNVPKGHIPVYVG---KTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFID-ITSRL

AT4G38840.1 SAUR-like auxin-responsive protein family6.8e-2657Show/hide
Query:  MGICLPSVLLGVAKQILKK----QSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH
        M I +P VL   +KQIL++     S SS    +VPKG++ VYVG+   KRF VP+SYL  PSF DLL++AEEEFGF HP+GGLTIPC EE FID+ SR +
Subjt:  MGICLPSVLLGVAKQILKK----QSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH

AT5G18060.1 SAUR-like auxin-responsive protein family3.7e-2457.65Show/hide
Query:  VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH
        VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFGF HP+GGLTIPC E+ FI++TSRLH
Subjt:  VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGT
GTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCC
ACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGT
GTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCC
ACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA
Protein sequenceShow/hide protein sequence
MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS