; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:6579282..6593489
RNA-Seq ExpressionLsi10G004390
SyntenyLsi10G004390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571061.1 hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1444.78Show/hide
Query:  SQAFMNLEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKYRNQKPSPLNFSHVYCDVTFRNTGLTSPRNGLCSENLLGTKENRRLTMEYILL
        ++ + NLEVTSMKASSLQ MVNPPVGWLNPNSSSALLSKSKNEGW                                               +T E+I  
Subjt:  SQAFMNLEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKYRNQKPSPLNFSHVYCDVTFRNTGLTSPRNGLCSENLLGTKENRRLTMEYILL

Query:  QVKRKELLGPLEDDGNQTLLQHGGVVAGMTDGLS
            +    P EDDGNQTLL  G  VAGM  GLS
Subjt:  QVKRKELLGPLEDDGNQTLLQHGGVVAGMTDGLS

KAG6605012.1 hypothetical protein SDJN03_02329, partial [Cucurbita argyrosperma subsp. sororia]7.7e-0581.58Show/hide
Query:  LEVISMKASSLQGIVKPPIGWLNPNSSSALLSKSTNEG
        LEV   KASSL GIVKPPIGW NPNSSS LLSKST EG
Subjt:  LEVISMKASSLQGIVKPPIGWLNPNSSSALLSKSTNEG

KAG7010876.1 hypothetical protein SDJN02_27674, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-0567.35Show/hide
Query:  FAVTAPTSLLSLEVISMKASSLQGIVKPPIGWLNPNSSSALLSKSTNEG
        FAVTAP SL             QGIVKPP+GWLNPNSSSAL SKSTNEG
Subjt:  FAVTAPTSLLSLEVISMKASSLQGIVKPPIGWLNPNSSSALLSKSTNEG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGAAGTTGATATGTTATTTCATCACTAAGGGAATGGTCAAACCTCCTGTTGGATGGCTGAACCCAAACTCTTCTTCAGCCCTACTAAGCAAGATGATTCAAGT
AAGAAATTGGAATAAAAAACCGCTTTCTCTGGTTTTCTCCAACGTACACTGGAATGTGGCCTTTGGGAACAACAGACTGACATCCTGTAGAAACGGACTTCATCTTGAGA
ATTTGCTTGGCGCTGAGGAGGACCGAAGGAAAACGAATTCCCATGCCTCCCTGTGGATGATGGAAGCCAAACTCTTCCTCTGCATGGCTGAGCAGTTGCTGGAACGACGG
ATGAGTTATGAAGAAAGAGCTATGAAGTTGATTGGTGCTTATCCAGTTGATAAGTGGGGTATTGGAGTCTGGTGGTTGGTAACATTCAACTCTATCTCCTACAGAAAAAG
AATGAAAGAAGTTGTCAAAACTGCAAGCAGGATTGCTCTTTGTTCTCAAGCTTTCATGAATCTAGAAGTGACATCAATGAAAGCTTCTTCTTTGCAGGGAATGGTCAACC
CTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAAAATGAAGGATGGTTCAAATATCGGAACCAAAAACCGAGTCCTCTGAATTTCTCC
CACGTATACTGCGATGTGACCTTTAGGAACACTGGATTGACATCTCCCAGAAATGGACTGTGTTCTGAGAATTTGCTTGGCACTAAAGAGAATAGACGGCTAACAATGGA
GTACATTCTCTTGCAAGTCAAAAGGAAAGAATTGTTAGGCCCCCTTGAGGATGATGGAAACCAAACTCTTCTTCAGCATGGCGGAGTAGTTGCTGGAATGACGGATGGTT
TAAGTAAGATATCGGAACCACGAACCGTTTCCTTTGAATCTCTCCCACATAAACTGCCACATGCCCTTTTGGAACATCCAAATGGTTTTTGGATTTGCTTGGCATTAGGA
ACCAAAGATAGCAACCGAATCCCCATTTCGTTTGAGATGAAAGTGAATGGTGCTTATCCAGTAGCTATAAGTAGGGTATTGGAGTCTTGTGGTTGGTTGCATTGCATCTA
CTTCAAGAAGCTGATGTACTTGAGACATGGATCATTAGCAATGGGAAAGAAGACTTTCGTCACAGCATTCGATCATCGAGCACCTGTCAATGCAAATCAAGTTCATTTTT
CCACAAGGAAGTATGATACATTTGCAGTCACAGCTCCAACTTCTTTGCTCAGTCTAGAAGTAATATCAATGAAGGCTTCTTCTTTGCAGGGAATTGTCAAACCTCCAATT
GGGTGGCTGAATCCAAACTCTTCTTCAGCCCTCTTGAGCAAGTCTACAAATGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGAAGTTGATATGTTATTTCATCACTAAGGGAATGGTCAAACCTCCTGTTGGATGGCTGAACCCAAACTCTTCTTCAGCCCTACTAAGCAAGATGATTCAAGT
AAGAAATTGGAATAAAAAACCGCTTTCTCTGGTTTTCTCCAACGTACACTGGAATGTGGCCTTTGGGAACAACAGACTGACATCCTGTAGAAACGGACTTCATCTTGAGA
ATTTGCTTGGCGCTGAGGAGGACCGAAGGAAAACGAATTCCCATGCCTCCCTGTGGATGATGGAAGCCAAACTCTTCCTCTGCATGGCTGAGCAGTTGCTGGAACGACGG
ATGAGTTATGAAGAAAGAGCTATGAAGTTGATTGGTGCTTATCCAGTTGATAAGTGGGGTATTGGAGTCTGGTGGTTGGTAACATTCAACTCTATCTCCTACAGAAAAAG
AATGAAAGAAGTTGTCAAAACTGCAAGCAGGATTGCTCTTTGTTCTCAAGCTTTCATGAATCTAGAAGTGACATCAATGAAAGCTTCTTCTTTGCAGGGAATGGTCAACC
CTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAAAATGAAGGATGGTTCAAATATCGGAACCAAAAACCGAGTCCTCTGAATTTCTCC
CACGTATACTGCGATGTGACCTTTAGGAACACTGGATTGACATCTCCCAGAAATGGACTGTGTTCTGAGAATTTGCTTGGCACTAAAGAGAATAGACGGCTAACAATGGA
GTACATTCTCTTGCAAGTCAAAAGGAAAGAATTGTTAGGCCCCCTTGAGGATGATGGAAACCAAACTCTTCTTCAGCATGGCGGAGTAGTTGCTGGAATGACGGATGGTT
TAAGTAAGATATCGGAACCACGAACCGTTTCCTTTGAATCTCTCCCACATAAACTGCCACATGCCCTTTTGGAACATCCAAATGGTTTTTGGATTTGCTTGGCATTAGGA
ACCAAAGATAGCAACCGAATCCCCATTTCGTTTGAGATGAAAGTGAATGGTGCTTATCCAGTAGCTATAAGTAGGGTATTGGAGTCTTGTGGTTGGTTGCATTGCATCTA
CTTCAAGAAGCTGATGTACTTGAGACATGGATCATTAGCAATGGGAAAGAAGACTTTCGTCACAGCATTCGATCATCGAGCACCTGTCAATGCAAATCAAGTTCATTTTT
CCACAAGGAAGTATGATACATTTGCAGTCACAGCTCCAACTTCTTTGCTCAGTCTAGAAGTAATATCAATGAAGGCTTCTTCTTTGCAGGGAATTGTCAAACCTCCAATT
GGGTGGCTGAATCCAAACTCTTCTTCAGCCCTCTTGAGCAAGTCTACAAATGAAGGATGA
Protein sequenceShow/hide protein sequence
MERKLICYFITKGMVKPPVGWLNPNSSSALLSKMIQVRNWNKKPLSLVFSNVHWNVAFGNNRLTSCRNGLHLENLLGAEEDRRKTNSHASLWMMEAKLFLCMAEQLLERR
MSYEERAMKLIGAYPVDKWGIGVWWLVTFNSISYRKRMKEVVKTASRIALCSQAFMNLEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKYRNQKPSPLNFS
HVYCDVTFRNTGLTSPRNGLCSENLLGTKENRRLTMEYILLQVKRKELLGPLEDDGNQTLLQHGGVVAGMTDGLSKISEPRTVSFESLPHKLPHALLEHPNGFWICLALG
TKDSNRIPISFEMKVNGAYPVAISRVLESCGWLHCIYFKKLMYLRHGSLAMGKKTFVTAFDHRAPVNANQVHFSTRKYDTFAVTAPTSLLSLEVISMKASSLQGIVKPPI
GWLNPNSSSALLSKSTNEG