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Lsi10G004400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr10:6582113..6582406
RNA-Seq ExpressionLsi10G004400
SyntenyLsi10G004400
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902158.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]6.7e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+AKQILKIQSG TKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEEEFGFHHPQGGLTIPCKEDAFTE+TSRLQ S
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

XP_022146168.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.1e-4392.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+AKQ+LKIQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEEEFGFHHPQGGLTIPCKEDAF  LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

XP_023007089.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]6.7e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVPNAKQILK+QS FTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LL HAEEEFGFHHPQGGLTIPCKEDAF +LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]8.8e-4491.75Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIR LSLVP+AKQILK+QSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEE+FGFHHPQGGLTIPCKEDAF +LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

XP_038900836.1 auxin-responsive protein SAUR21-like [Benincasa hispida]2.3e-4493.81Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+ K+ILKIQSGF KNHLDVPKGHVAVYVG IQRKRFVVPISYLNHPSFQQLL HAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A1S4E1Q7 auxin-responsive protein SAUR24-like3.3e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+AKQILKIQSG TKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEEEFGFHHPQGGLTIPCKEDAFTE+TSRLQ S
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

A0A5A7TQL7 Auxin-responsive protein SAUR24-like3.3e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+AKQILKIQSG TKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEEEFGFHHPQGGLTIPCKEDAFTE+TSRLQ S
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

A0A6J1CXV3 auxin-responsive protein SAUR24-like5.6e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVP+AKQ+LKIQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEEEFGFHHPQGGLTIPCKEDAF  LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like5.6e-4491.75Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIR LSLVP+AKQILK+QSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEE+FGFHHPQGGLTIPCKEDAF +LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

A0A6J1L403 auxin-responsive protein SAUR21-like3.3e-4492.78Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        MGIRLLSLVPNAKQILK+QS FTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LL HAEEEFGFHHPQGGLTIPCKEDAF +LTSRLQVS
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR223.4e-2257.78Show/hide
Query:  LSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ
        ++LV +     KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED F  +TSRLQ
Subjt:  LSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.2e-2169.7Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F  +TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.6e-2264.56Show/hide
Query:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ
        KI S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F  +TSR Q
Subjt:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ

Q9FJG1 Auxin-responsive protein SAUR197.5e-2263.29Show/hide
Query:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ
        KI S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F  +TSRLQ
Subjt:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.5e-2264.56Show/hide
Query:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ
        KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F  +TSRLQ
Subjt:  KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.1e-2758.16Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS
        M IR+  ++ ++KQ+LK  S  + N++ +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LLR AEEEFGF HP GGLTIPC E  F +L SRL  S
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

AT4G34770.1 SAUR-like auxin-responsive protein family3.7e-2457.69Show/hide
Query:  MGIRLLSLVPNAKQILKIQSG------FTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSR
        MGI+L+ L    +++ +  S        T    +VPKGHVAVYVGE   RKRFV+PISYLNHP FQ LL  AEEEFGF HP GGLTIPC ED FT L S 
Subjt:  MGIRLLSLVPNAKQILKIQSG------FTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSR

Query:  LQVS
        L  S
Subjt:  LQVS

AT4G34790.1 SAUR-like auxin-responsive protein family3.3e-2555.56Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFT
        MG+ + S++PNAKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L  AEEE GFHH  GGLTIPC+E++F 
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFT

Query:  ELTSRLQV
         L +  Q+
Subjt:  ELTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family8.8e-2656.19Show/hide
Query:  MGIRLLSLVPNAKQILKIQSGFTKNHLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTEL-
        MG+   ++    KQILK+ S   +N         VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ L  AEEEFGF+HP GGLTIPC+E+ F +L 
Subjt:  MGIRLLSLVPNAKQILKIQSGFTKNHLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTEL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family8.0e-2758.76Show/hide
Query:  MGIRLLSLVPNAKQILK----IQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSR
        M IR+  ++ ++KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LLR AEEEFGF HP GGLTIPC E+ F +L SR
Subjt:  MGIRLLSLVPNAKQILK----IQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTAATGCCAAGCAAATCCTGAAGATTCAGTCAGGATTTACCAAAAACCATTTGGATGTTCCAAAAGGGCATGTGGCAGTTTA
TGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCGTCATTCCAGCAACTACTCCGCCATGCTGAAGAAGAGTTTGGTTTCCATCATC
CTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAACTGACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTAATGCCAAGCAAATCCTGAAGATTCAGTCAGGATTTACCAAAAACCATTTGGATGTTCCAAAAGGGCATGTGGCAGTTTA
TGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCGTCATTCCAGCAACTACTCCGCCATGCTGAAGAAGAGTTTGGTTTCCATCATC
CTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAACTGACTTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS