; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin responsive SAUR protein
Genome locationchr10:6590920..6592609
RNA-Seq ExpressionLsi10G004430
SyntenyLsi10G004430
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8370053.1 hypothetical protein HHK36_031907 [Tetracentron sinense]4.6e-5756.87Show/hide
Query:  MKSVSTGCQSVVPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDL--------VLCRSDQNFRFYIAFRLK-
        M++ S    + VPKGH  VYVGE Q+KRF +PISYLNHPSF +LL RAEEEFGF HP GGLTIPC E+ FI+L        ++ +  +  R   A +++ 
Subjt:  MKSVSTGCQSVVPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDL--------VLCRSDQNFRFYIAFRLK-

Query:  ---------HMGIRFLSLVPHAKQILKMQSGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCK
                  MGIR  S+  HAKQILK+QS F++NQL       DV KGHVAVYVGE Q+KRFVVPI+++NHPSFQ LLS  EEEFG+ HP GGLTIPCK
Subjt:  ---------HMGIRFLSLVPHAKQILKMQSGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCK

Query:  DDAFTELTSRL
        + AF  LTSRL
Subjt:  DDAFTELTSRL

KAF8370056.1 hypothetical protein HHK36_031911 [Tetracentron sinense]1.1e-5864.29Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKGH  VYVGENQ+KR+ +P+SYLNHPSF +LL+RAEEEFGF HP GGLTIPCKE  FIDL   RS  +     +  +  MGIR  SL  HAKQILK+Q
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        S  ++NQL       DVPKGH AVYVGE  +KRFVVPI+++NHPSFQ LL+  EEEFG++HP GGLTIPCK+ AF +LTSRL
Subjt:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

KAF8370058.1 hypothetical protein HHK36_031913 [Tetracentron sinense]4.2e-5865.38Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKG   VYVGENQ++RF +PIS+LNHPSF +LL+RAEEEFG+ HP GGLTIPCKE AFIDL          F+ A R   MGIR  SL  HAKQILK+Q
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        S  ++NQL       DVPKGH AVYVGE Q+KRFVVPI+++NHPSFQ LLS  EEEFG+ HP GGLTIPCK+ AF +LTSRL
Subjt:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

KAF8377846.1 hypothetical protein HHK36_031232 [Tetracentron sinense]1.4e-5863.74Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKGH  VYVGENQ+KR+ +P+SYLNHPSF +LL+RAEEEFGF HP GGLTIPCKE  FIDL   RS  +     +  +  MGIR  SL  HAKQILK+Q
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        S  ++NQL       DVPKGH AVYVGE  ++RFVVPI+++NHPSFQ LL+  EEEFG++HP GGLTIPCK+ AF +LTSRL
Subjt:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

KAF8377847.1 hypothetical protein HHK36_031233 [Tetracentron sinense]7.9e-5763.19Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKGH  VYVGENQ+ RF +PIS+LNHPSF +LL+RAEEEFG++HP GGLTIPCKE AFIDL    +      + A R   MGIR LS+V HAKQILK+Q
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        S  ++NQL       DVPKGH AVYVGE Q++RFV PI+++NHPSFQ LLS  +EEFG+ HP GGLTIPCK+ AF ++TS L
Subjt:  SGFSKNQL-------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

TrEMBL top hitse value%identityAlignment
A0A498JQ73 Uncharacterized protein1.9e-4853.48Show/hide
Query:  SVSTGCQSVVPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVP
        S +    + VPKGH  VYVGE+++KRF IPISYLNHP F +LL++AEEEFG+ HPTGGLTIPC E+ F+ L  C +      YI   +KH          
Subjt:  SVSTGCQSVVPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVP

Query:  HAKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS
            ILK+QS  S +  +VPKGHVAVYVGE  +KR+VVP+ Y+NHPSF+ LL   EEEFGF+HP GGLTIPCK++ F  L   L ++
Subjt:  HAKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS

A0A4Y7JZW6 Uncharacterized protein1.2e-5058.29Show/hide
Query:  VYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQSGFSKNQ
        VYVGE ++K F +P+SYLNHP+F +LLSRAEEEFGF HP GGLTIPCK  AF+DL    + Q+   ++ F+   M IRF S+V  +KQILK+QS  ++  
Subjt:  VYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQSGFSKNQ

Query:  ----LDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS
            +DVPKGH  VYVGE ++KRF+VPI+Y+NHP FQ LL   EEEFGF HP GGLTIPCK+ AF +LT++L  S
Subjt:  ----LDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS

A0A5B6WMK6 Auxin-responsive protein SAUR23-like5.5e-5659.57Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLV---------LCRSDQNFRF----YIAFRLKHMGIRFL
        VPKGHI VYVGE +  RF +PISYLNHP F++LL RAEEEFGF+HP GGLTIPC E+AFIDL             + Q F      +I  +  +MGI   
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLV---------LCRSDQNFRF----YIAFRLKHMGIRFL

Query:  SLVPHAKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        S++ HAKQ+LK Q   S+NQL VPKGH+AVYVGE+++ RFVVPI+Y+NHP F  LL   EEEFGF+HP GGLTIPC +DAF +LTSRL
Subjt:  SLVPHAKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

A0A5C7I8B9 Uncharacterized protein2.5e-4857.87Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKG++ VYVGE+Q+KRF IPIS+LN PSF  LL  AEEEFGF+HP GGLTIPC E+ FIDL           +  F    M IR L  + H KQIL+  
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFS--KNQLDVPKGHVAVYVGE-IQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        + FS   +  DVPKG++AVYVGE  Q+KRFV+P+++++ PSFQ+LL   EEEFGF+HP GGLTIPC +D FT+LTSRL
Subjt:  SGFS--KNQLDVPKGHVAVYVGE-IQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

A0A7J7LNK3 Uncharacterized protein3.8e-5763.44Show/hide
Query:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ
        VPKGH  VYVGE  +KRF IPI YLNHP F +LL+RAEEEFGF HPTGGLTIPCK E  + +  C      RFY   ++  MGIR LS+  HAKQILK Q
Subjt:  VPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKMQ

Query:  SGFSKNQL--------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS
        S  +KNQL        DVPKGH+AVYVGE ++KRFVVPI+Y+NHPSFQ LLS  EEEFGF H  GGLTIPCK+ AF + TSRL  S
Subjt:  SGFSKNQL--------DVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B9.5e-2158.02Show/hide
Query:  QSGFSKNQ-----LDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL
        ++ FS NQ     +DV KG++AVYVGE + +RFV+P++Y+N PSFQ LLS  EEEFG+HHP GGLTIPC +D F  +TS L
Subjt:  QSGFSKNQ-----LDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRL

Q9FJF7 Auxin-responsive protein SAUR229.5e-2166.67Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ
        PKG +AVYVGE Q+KR++VP++Y+N PSFQ LLS  E+EFGF HP GGLTIPC +D F  +TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.2e-2057.14Show/hide
Query:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ
        AK+IL   +  +      PKG +AVYVGE Q+KR++VP++Y++ PSFQ LLS  EEEFGF HP GGLTIPC +D F  +TSRLQ
Subjt:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ

Q9FJG0 Auxin-responsive protein SAUR207.3e-2168.18Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ
        PKG +AVYVGE Q+KR++VPI+Y+N PSFQ LLS  EEEFGF HP GGLTIPC +D F  +TSR Q
Subjt:  PKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ

Q9FK62 Auxin-responsive protein SAUR246.6e-2259.52Show/hide
Query:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP++Y+N PSFQ LLS  EEEFGF HP GGLTIPC +D F  +TSRLQ
Subjt:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.0e-2556.12Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFSKNQLDVPKGHVAVYVGE-IQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS
        M IR   ++  +KQ+LK  S  S N + +PKGH+AVYVGE +Q++RFVVP+TY++HP FQ+LL   EEEFGF HP GGLTIPC +  F +L SRL  S
Subjt:  MGIRFLSLVPHAKQILKMQSGFSKNQLDVPKGHVAVYVGE-IQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS

AT4G34800.1 SAUR-like auxin-responsive protein family5.5e-2472.06Show/hide
Query:  QSVVPKGHIPVYVGE--NQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLV
        QS VPKGH+ VYVGE    +KRF +PISYLNHPSF  LLSRAEEEFGF+HP GGLTIPC+EE F+ L+
Subjt:  QSVVPKGHIPVYVGE--NQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLV

AT4G34810.1 SAUR-like auxin-responsive protein family5.5e-2463.16Show/hide
Query:  STGCQSVVPKGHIPVYVGEN---QRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCR
        S+     VPKGH+ VYVGE    ++KRF +PIS+LNHPSF   LSRAEEEFGF+HP GGLTIPC+EE F+DL+  R
Subjt:  STGCQSVVPKGHIPVYVGEN---QRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCR

AT4G38840.1 SAUR-like auxin-responsive protein family1.5e-2454.64Show/hide
Query:  MGIRFLSLVPHAKQILK----MQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSR
        M IR   ++  +KQIL+    + S  S + LDVPKG++AVYVGE   KRFVVP++Y++ PSFQ LL   EEEFGF HP GGLTIPC ++ F +L SR
Subjt:  MGIRFLSLVPHAKQILK----MQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSR

AT5G18080.1 SAUR-like auxin-responsive protein family4.7e-2359.52Show/hide
Query:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP++Y+N PSFQ LLS  EEEFGF HP GGLTIPC +D F  +TSRLQ
Subjt:  AKQILKMQSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCGTTTCTACAGGATGTCAGTCTGTTGTTCCCAAAGGCCACATTCCAGTGTACGTTGGAGAAAACCAGAGAAAGCGGTTTTTTATTCCAATTTCTTACTTGAA
TCATCCTTCATTTGTAAACTTGCTTAGTAGGGCTGAAGAAGAGTTTGGGTTCAGCCATCCAACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATTTGG
TTCTGTGCCGATCTGATCAAAACTTCAGATTTTACATAGCCTTTCGTCTCAAACATATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATG
CAGTCAGGTTTTAGCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAGCGATTTGTGGTTCCAATAACTTACATAAACCA
TCCATCATTCCAGCAACTACTCAGCCATGTAGAGGAGGAATTTGGCTTCCATCATCCGCAGGGGGGCCTAACGATCCCTTGCAAAGACGATGCCTTTACTGAACTCACTT
CTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCCGTTTCTACAGGATGTCAGTCTGTTGTTCCCAAAGGCCACATTCCAGTGTACGTTGGAGAAAACCAGAGAAAGCGGTTTTTTATTCCAATTTCTTACTTGAA
TCATCCTTCATTTGTAAACTTGCTTAGTAGGGCTGAAGAAGAGTTTGGGTTCAGCCATCCAACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATTTGG
TTCTGTGCCGATCTGATCAAAACTTCAGATTTTACATAGCCTTTCGTCTCAAACATATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATG
CAGTCAGGTTTTAGCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAGATCCAAAGGAAGCGATTTGTGGTTCCAATAACTTACATAAACCA
TCCATCATTCCAGCAACTACTCAGCCATGTAGAGGAGGAATTTGGCTTCCATCATCCGCAGGGGGGCCTAACGATCCCTTGCAAAGACGATGCCTTTACTGAACTCACTT
CTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MKSVSTGCQSVVPKGHIPVYVGENQRKRFFIPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDLVLCRSDQNFRFYIAFRLKHMGIRFLSLVPHAKQILKM
QSGFSKNQLDVPKGHVAVYVGEIQRKRFVVPITYINHPSFQQLLSHVEEEFGFHHPQGGLTIPCKDDAFTELTSRLQVS