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Lsi10G004440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6594135..6594428
RNA-Seq ExpressionLsi10G004440
SyntenyLsi10G004440
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457635.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.4e-4696.91Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIRLLS VPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQG LTIPCKEDTFLDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]6.7e-4491.75Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLS+AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.5e-4390.72Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQLLS+AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.0e-4390.72Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIRLLS VPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+LLS+AEEEFGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.5e-4390.72Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLL++AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A1S3C5X3 auxin-responsive protein SAUR21-like7.0e-4796.91Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIRLLS VPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQG LTIPCKEDTFLDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

A0A5D3BKE3 Auxin-responsive protein SAUR21-like7.0e-4796.91Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIRLLS VPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQG LTIPCKEDTFLDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

A0A6J1FU83 auxin-responsive protein SAUR24-like7.3e-4490.72Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQLLS+AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like3.3e-4491.75Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLS+AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like3.3e-4491.75Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        MGIR LS VPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLS+AEE+FGFHHPQG LTIPCKED F+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.4e-2271.21Show/hide
Query:  PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +E+EFGF HP G LTIPC EDTF+++TSRLQ
Subjt:  PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR217.5e-2271.21Show/hide
Query:  PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSRLQ
Subjt:  PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR208.9e-2358.89Show/hide
Query:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSR Q
Subjt:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.4e-2257.78Show/hide
Query:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSRLQ
Subjt:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.0e-2363.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.7e-2657.14Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS
        M IR+   +  +KQ+LK  S  + N + +PKGH+AVYVGE +Q +RFVVP++YL+HP FQ+LL  AEEEFGF HP G LTIPC E  F+DL SRL  S
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family4.0e-2658.1Show/hide
Query:  MGIRLLSFVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDL-
        MG+   +     KQILK+ S   +N+        VPKGHVAVYVG   E++ KRFVVPIS+LNHPSF++ LS AEEEFGF+HP G LTIPC+E+ FLDL 
Subjt:  MGIRLLSFVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family8.8e-2657.73Show/hide
Query:  MGIRLLSFVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSR
        M IR+   +  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP G LTIPC E+ F+DL SR
Subjt:  MGIRLLSFVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family6.3e-2458.89Show/hide
Query:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSR Q
Subjt:  LSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family2.8e-2463.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF HP G LTIPC EDTF+++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGATTGCTATCTTTCGTTCCTCATGCAAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGACATGTGGCAGTTTA
CGTGGGAGAGATTCAAAGCAAGCGGTTTGTGGTTCCAATATCTTACTTGAATCATCCATCATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGCTTCCATCATC
CGCAGGGGGCCCTAACAATTCCTTGTAAAGAAGATACCTTTCTTGATCTCACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGATTGCTATCTTTCGTTCCTCATGCAAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGACATGTGGCAGTTTA
CGTGGGAGAGATTCAAAGCAAGCGGTTTGTGGTTCCAATATCTTACTTGAATCATCCATCATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGCTTCCATCATC
CGCAGGGGGCCCTAACAATTCCTTGTAAAGAAGATACCTTTCTTGATCTCACTTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSFVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGALTIPCKEDTFLDLTSRLQVS