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Lsi10G004450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr10:6596141..6596434
RNA-Seq ExpressionLsi10G004450
SyntenyLsi10G004450
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.6e-4391.67Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]3.3e-4391.67Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

XP_023533286.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]4.4e-4390.62Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILK+Q+G TKSQKDVPKGHVA+YVGE+QRKRF+VPISYLNHP FQ+LLSHAEEEFGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]3.3e-4390.62Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCK DAF+DLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

XP_038900564.1 auxin-responsive protein SAUR24-like [Benincasa hispida]1.9e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQVF
        MGIRLLSLVPHAKQILKMQ GITKSQKDVPKGHVA+YVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLT RLQVF
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQVF

TrEMBL top hitse value%identityAlignment
A0A6J1FVI4 auxin-responsive protein SAUR24-like3.6e-4390.62Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIR LSLVPHAKQILKMQ+G TK+Q DVPKGHVA+YVGE+QRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

A0A6J1G6T7 auxin-responsive protein SAUR24-like1.2e-4391.67Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

A0A6J1G6U1 auxin-responsive protein SAUR23-like2.8e-4390.62Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCK DAF+DLTSRL V
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

A0A6J1JHE3 auxin-responsive protein SAUR24-like3.6e-4390.62Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIR LSLVPHAKQILKMQ+G TK+Q DVPKGHVA+YVGE+QRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

A0A6J1KZJ6 auxin-responsive protein SAUR24-like1.6e-4391.67Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV
        MGIRLLSLVPHAKQILKMQ+G TKSQ DVPKGHVA+YVGE+QRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCK DAFIDLTSRLQV
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQV

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.5e-2261.45Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRL
        AK+IL   A    +    PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSRL
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.2e-2260.71Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL      T +    PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC  D FI++TSRLQ
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.8e-2361.9Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL      T +    PKG +A+YVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSR Q
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.6e-2260.71Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL      T +    PKG +A+YVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSRLQ
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2361.9Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL    G   +    PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSRLQ
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.7e-2556.84Show/hide
Query:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGE-MQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRL
        M IR+  ++  +KQ+LK     + +   +PKGH+A+YVGE MQ++RFVVP++YL+HP FQ+LL  AEEEFGF HP GGLTIPC    FIDL SRL
Subjt:  MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGE-MQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRL

AT4G34810.1 SAUR-like auxin-responsive protein family6.7e-2656.19Show/hide
Query:  MGIRLLSLVPHAKQILKMQA------GITKSQKDVPKGHVAIYVG---EMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDL-
        MG+   ++    KQILK+ +        + S   VPKGHVA+YVG   EM++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+ + F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQA------GITKSQKDVPKGHVAIYVG---EMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.1e-2556.7Show/hide
Query:  MGIRLLSLVPHAKQILK----MQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSR
        M IR+  ++  +KQIL+    + +  + S  DVPKG++A+YVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC  + FIDL SR
Subjt:  MGIRLLSLVPHAKQILK----MQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family4.8e-2461.9Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL      T +    PKG +A+YVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSR Q
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2461.9Show/hide
Query:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ
        AK+IL    G   +    PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC  D FI++TSRLQ
Subjt:  AKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTCAAGATGCAGGCAGGCATCACCAAAAGTCAGAAGGATGTTCCAAAAGGCCATGTAGCCATATA
TGTGGGAGAGATGCAAAGGAAGCGGTTCGTGGTTCCAATATCATACTTGAACCATCCATCATTCCAGCAATTGCTTAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATC
CGCAGGGGGGTCTAACAATTCCTTGCAAAGTGGATGCCTTTATTGATCTCACTTCAAGATTGCAAGTATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTCAAGATGCAGGCAGGCATCACCAAAAGTCAGAAGGATGTTCCAAAAGGCCATGTAGCCATATA
TGTGGGAGAGATGCAAAGGAAGCGGTTCGTGGTTCCAATATCATACTTGAACCATCCATCATTCCAGCAATTGCTTAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATC
CGCAGGGGGGTCTAACAATTCCTTGCAAAGTGGATGCCTTTATTGATCTCACTTCAAGATTGCAAGTATTTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQAGITKSQKDVPKGHVAIYVGEMQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKVDAFIDLTSRLQVF