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Lsi10G004470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr10:6609877..6611066
RNA-Seq ExpressionLsi10G004470
SyntenyLsi10G004470
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944371.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]1.0e-4394.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL
        MGIR LSLVPHAKQILKMQPGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLS AEE+FGF+HPQGGLTIPCKEDAFIDLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]7.9e-4494.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLS AEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]1.0e-4394.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLS AEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.0e-4393.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLS AEEEFGF+HPQGGLTIPCKEDAF+DLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

XP_038900563.1 auxin-responsive protein SAUR21-like [Benincasa hispida]1.2e-4495.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQP FTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLS AEEEFGF+HPQGG+TIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

TrEMBL top hitse value%identityAlignment
A0A6J1FU85 auxin-responsive protein SAUR23-like5.0e-4494.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL
        MGIR LSLVPHAKQILKMQPGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLS AEE+FGF+HPQGGLTIPCKEDAFIDLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL

A0A6J1G6T7 auxin-responsive protein SAUR24-like3.8e-4494.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLS AEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1G6U1 auxin-responsive protein SAUR23-like8.5e-4494.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLS AEEEFGF+HPQGGLTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL

A0A6J1JHE3 auxin-responsive protein SAUR24-like1.1e-4393.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQ GFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLS AEE+FGF+HPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1KZJ6 auxin-responsive protein SAUR24-like5.0e-4494.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQ GFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLS AEEEFGF+HPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.1e-2363.1Show/hide
Query:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR218.0e-2372.73Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR201.2e-2364.29Show/hide
Query:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS++EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.7e-2363.1Show/hide
Query:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR243.2e-2464.29Show/hide
Query:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL    G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.6e-2657.89Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL
        M IR+  ++  +KQ+LK     + + + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL +AEEEFGF HP GGLTIPC E  FIDL SRL
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRL

AT4G34800.1 SAUR-like auxin-responsive protein family1.4e-2571.43Show/hide
Query:  KSQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQCIL
        K Q  VPKGHVAVYVGE    +KRFVVPISYLNHPSFQ LLSRAEEEFGF HP GGLTIPC+E+ F+ L +   CI+
Subjt:  KSQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQCIL

AT4G34810.1 SAUR-like auxin-responsive protein family2.7e-2657.14Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+     +++        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LSRAEEEFGF HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family5.5e-2759.79Show/hide
Query:  MGIRLLSLVPHAKQILK----MQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    +    + S LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL +AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPHAKQILK----MQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family2.3e-2564.29Show/hide
Query:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL    G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCTAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTCGCTGTTTA
CGTTGGAGAGATCCAAAGGAAGCGATTCGTGGTTCCAATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCGTGCGGAGGAAGAGTTTGGTTTCTATCATC
CTCAGGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAATGCATTCTTCGTTTCAAGAAAGAGAGGAGAAAGATCTCTTCTGAG
TCGGGCAAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCTAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTCGCTGTTTA
CGTTGGAGAGATCCAAAGGAAGCGATTCGTGGTTCCAATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCGTGCGGAGGAAGAGTTTGGTTTCTATCATC
CTCAGGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAATGCATTCTTCGTTTCAAGAAAGAGAGGAGAAAGATCTCTTCTGAG
TCGGGCAAATCCTAA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQPGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFYHPQGGLTIPCKEDAFIDLTSRLQCILRFKKERRKISSE
SGKS