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Lsi10G004480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6612425..6612667
RNA-Seq ExpressionLsi10G004480
SyntenyLsi10G004480
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3695Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        M TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFI+LTSRLQTS
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]2.3e-3796.25Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFI+LTSRLQ S
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]2.3e-3796.25Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFI+LTSRLQ S
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.9e-3695Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        M TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFI+LTSRLQTS
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]1.9e-3695Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        M TV SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFI+LTSRLQTS
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.1e-3796.25Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFI+LTSRLQ S
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

A0A1S3C787 auxin-responsive protein SAUR21-like1.1e-3796.25Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFI+LTSRLQ S
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like1.1e-3796.25Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFI+LTSRLQ S
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like9.3e-3795Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        M TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFI+LTSRLQTS
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like9.3e-3795Show/hide
Query:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        M TV SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFI+LTSRLQTS
Subjt:  MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.6e-2268.18Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.8e-2261.33Show/hide
Query:  VSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        +S       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  VSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.1e-2269.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR194.7e-2268.18Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

Q9FK62 Auxin-responsive protein SAUR249.6e-2369.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.1e-2563.16Show/hide
Query:  SRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS
        S N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI L SRL TS
Subjt:  SRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS

AT4G34800.1 SAUR-like auxin-responsive protein family5.2e-2469.01Show/hide
Query:  SSRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISL
        S + Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF  LL  AEEEFGF HP GGLTIPCRE+ F+ L
Subjt:  SSRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISL

AT4G34810.1 SAUR-like auxin-responsive protein family1.8e-2467.95Show/hide
Query:  SSRNQCGVPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISL-TSRLQ
        SS +   VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF+ L  SRLQ
Subjt:  SSRNQCGVPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISL-TSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.2e-2368.18Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family6.8e-2469.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATACTGTTTCTTCTAGAAATCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGGTTTGTAGTTCCAATATCATACTTAAA
CCATCCTTCCTTTTCAGCTTTGCTCAAGAGTGCTGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAGTCTCA
CATCCAGGCTGCAAACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATACTGTTTCTTCTAGAAATCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGGTTTGTAGTTCCAATATCATACTTAAA
CCATCCTTCCTTTTCAGCTTTGCTCAAGAGTGCTGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAGTCTCA
CATCCAGGCTGCAAACTTCCTGA
Protein sequenceShow/hide protein sequence
MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFISLTSRLQTS