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Lsi10G004500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6619825..6620118
RNA-Seq ExpressionLsi10G004500
SyntenyLsi10G004500
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]9.4e-4694.85Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+ KMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]1.4e-4697.94Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQVFKM TVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]4.2e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLL NAKQVFKM TVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]9.4e-4694.85Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+ KMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]7.2e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQV KMQTV SRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein7.0e-4797.94Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQVFKM TVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A1S3C787 auxin-responsive protein SAUR21-like2.0e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLL NAKQVFKM TVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like2.0e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLL NAKQVFKM TVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like4.5e-4694.85Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+ KMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like3.5e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQV KMQTV SRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.1e-2459.77Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.6e-2460.92Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.6e-2458.62Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T ++      PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.6e-2459.77Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.7e-2459.77Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.1e-2757.14Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        M IR+  +L ++KQ+ K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI+L SRL TS
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

AT4G34810.1 SAUR-like auxin-responsive protein family4.0e-2654.29Show/hide
Query:  MGIRLPSLLLNAKQVFKMQTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ+ K+ ++++RN+        VPKGH+AVYVG   ++E+KRFVVP+S+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQVFKMQTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family2.3e-2655.67Show/hide
Query:  MGIRLPSLLLNAKQVFK----MQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQ+ +    + + SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQVFK----MQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR

AT5G18030.1 SAUR-like auxin-responsive protein family1.1e-2560.92Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.5e-2559.77Show/hide
Query:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTCTTCAAAATGCAAACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTCTTCAAAATGCAAACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAACTTCCTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQVFKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS