; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr10:6623257..6623550
RNA-Seq ExpressionLsi10G004510
SyntenyLsi10G004510
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571056.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4594.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLSHAEE+FGFHH +GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.4e-4695.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]3.2e-4694.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]3.2e-4694.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLL+HAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

XP_038901159.1 auxin-responsive protein SAUR24-like [Benincasa hispida]1.1e-4695.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQ+LL HAEEEFGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

TrEMBL top hitse value%identityAlignment
A0A6J1FU83 auxin-responsive protein SAUR24-like1.6e-4694.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

A0A6J1FU85 auxin-responsive protein SAUR23-like1.0e-4593.81Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRL V+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

A0A6J1FVI4 auxin-responsive protein SAUR24-like7.0e-4795.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

A0A6J1G6T7 auxin-responsive protein SAUR24-like2.9e-4592.78Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIR LSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+LLSHAEEEFGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.0e-4795.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQLLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B2.0e-2262.96Show/hide
Query:  QSGFTKNQ-----LDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRL
        ++ F+ NQ     +DV KG++AVYVGE +M+RFV+P+SYLN PSFQ LLS AEEEFG+HHP GGLTIPC ED F  +TS L
Subjt:  QSGFTKNQ-----LDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.5e-2272.73Show/hide
Query:  PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.6e-2272.73Show/hide
Query:  PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.8e-2365.82Show/hide
Query:  KMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.4e-2364.29Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.4e-2658.16Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA
        M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q +RFVVP++YL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FIDL SRL  +
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

AT4G34790.1 SAUR-like auxin-responsive protein family9.7e-2555.88Show/hide
Query:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRL
        S++P+AKQI K QS   KN              VPKGHVAVYVGE ++ KRFVVPISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  
Subjt:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRL

Query:  QV
        Q+
Subjt:  QV

AT4G34810.1 SAUR-like auxin-responsive protein family8.0e-2758.1Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E++ KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.2e-2760.82Show/hide
Query:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSR
        M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE  MKRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family9.7e-2564.29Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTA
TGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
CTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTA
TGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
CTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA
Protein sequenceShow/hide protein sequence
MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA