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Lsi10G004520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6624649..6624927
RNA-Seq ExpressionLsi10G004520
SyntenyLsi10G004520
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147014.1 auxin-responsive protein SAUR21 [Cucumis sativus]7.8e-4292.39Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPSLLLNAKQ+LKK  Q DVPKGHIAVYVG+IQRKRFLVP+SYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

XP_008457638.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]6.6e-4191.3Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LP LLLNAKQ+LKK  QSDVPKGHIAVYVG+IQRKRFLVP+S LNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

XP_022146164.1 auxin-responsive protein SAUR23-like [Momordica charantia]6.8e-3884.54Show/hide
Query:  MGIWLPSLLLNAKQVLKKQA-----QSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPS+LLNA+QVLK  A     Q DVPKGHIAVYVGEIQRKRFLVP+SYLNHP FM LLKRAEEEFGYNHPMGGLTIPCREDAF+DLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQA-----QSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

XP_022146173.1 auxin-responsive protein SAUR23-like [Momordica charantia]4.9e-3678.35Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQS-----DVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPS+LLNAKQ+LK QA S     D+PKGHIAVYVGEIQ KRF+VP+SYLNHP+F+ LLKRAEEEFG+NHPMGGLTIPCRE+AF+DLTSRLH+S
Subjt:  MGIWLPSLLLNAKQVLKKQAQS-----DVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

XP_038901160.1 auxin-responsive protein SAUR21-like [Benincasa hispida]1.1e-4396.74Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPSLLLNA+QVLKKQAQSDVPKGHIAVYVGEIQRKRFLVP+SYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

TrEMBL top hitse value%identityAlignment
A0A0A0LLG5 Uncharacterized protein3.8e-4292.39Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPSLLLNAKQ+LKK  Q DVPKGHIAVYVG+IQRKRFLVP+SYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

A0A1S3C5I8 auxin-responsive protein SAUR21-like3.2e-4191.3Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LP LLLNAKQ+LKK  QSDVPKGHIAVYVG+IQRKRFLVP+S LNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

A0A5D3BJX3 Auxin-responsive protein SAUR21-like3.2e-4191.3Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LP LLLNAKQ+LKK  QSDVPKGHIAVYVG+IQRKRFLVP+S LNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

A0A6J1CXC2 auxin-responsive protein SAUR23-like3.3e-3884.54Show/hide
Query:  MGIWLPSLLLNAKQVLKKQA-----QSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPS+LLNA+QVLK  A     Q DVPKGHIAVYVGEIQRKRFLVP+SYLNHP FM LLKRAEEEFGYNHPMGGLTIPCREDAF+DLTSRLHSS
Subjt:  MGIWLPSLLLNAKQVLKKQA-----QSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

A0A6J1CXW2 auxin-responsive protein SAUR23-like2.4e-3678.35Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQS-----DVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        MGI LPS+LLNAKQ+LK QA S     D+PKGHIAVYVGEIQ KRF+VP+SYLNHP+F+ LLKRAEEEFG+NHPMGGLTIPCRE+AF+DLTSRLH+S
Subjt:  MGIWLPSLLLNAKQVLKKQAQS-----DVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.8e-2665.48Show/hide
Query:  LLNAKQVLKKQAQ--SDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH
        LL AK++L + A   S  PKG +AVYVGE Q+KR+LVPLSYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRLH
Subjt:  LLNAKQVLKKQAQ--SDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH

Q9FJF7 Auxin-responsive protein SAUR222.4e-2563.86Show/hide
Query:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   A S  PKG +AVYVGE Q+KR+LVPLSYLN P+F ALL ++E+EFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL

Q9FJF9 Auxin-responsive protein SAUR214.8e-2664.2Show/hide
Query:  LLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   S  PKG +AVYVGE Q+KR+LVPLSYL+ P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL

Q9FJG0 Auxin-responsive protein SAUR206.9e-2563.41Show/hide
Query:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSR
        LL AK++L +   A S  PKG +AVYVGE Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSR
Subjt:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSR

Q9FK62 Auxin-responsive protein SAUR244.0e-2563.86Show/hide
Query:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   A S  PKG +AVYVGE Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.2e-2655.67Show/hide
Query:  MGIWLPSLLLNAKQVLKKQAQSD----VPKGHIAVYVGE-IQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
        M I +  +L ++KQ+LK  + S     +PKGH+AVYVGE +Q++RF+VP++YL+HP F  LL++AEEEFG++HPMGGLTIPC E  F+DL SRL +S
Subjt:  MGIWLPSLLLNAKQVLKKQAQSD----VPKGHIAVYVGE-IQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS

AT5G18030.1 SAUR-like auxin-responsive protein family3.4e-2764.2Show/hide
Query:  LLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   S  PKG +AVYVGE Q+KR+LVPLSYL+ P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family1.7e-2663.86Show/hide
Query:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   A S  PKG +AVYVGE Q+KR+LVPLSYLN P+F ALL ++E+EFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL

AT5G18060.1 SAUR-like auxin-responsive protein family3.4e-2765.48Show/hide
Query:  LLNAKQVLKKQAQ--SDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH
        LL AK++L + A   S  PKG +AVYVGE Q+KR+LVPLSYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRLH
Subjt:  LLNAKQVLKKQAQ--SDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH

AT5G18080.1 SAUR-like auxin-responsive protein family2.9e-2663.86Show/hide
Query:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL
        LL AK++L +   A S  PKG +AVYVGE Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F+++TSRL
Subjt:  LLNAKQVLKKQ--AQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCTGGTTGCCTTCGCTACTCCTCAATGCCAAGCAGGTTCTCAAAAAGCAAGCTCAATCTGATGTTCCAAAAGGTCATATTGCAGTTTATGTCGGAGAAATCCA
AAGGAAGCGGTTTTTAGTTCCGTTATCGTACTTGAACCATCCTACATTCATGGCTTTGCTTAAGAGGGCTGAGGAAGAGTTTGGATACAATCATCCAATGGGGGGTTTGA
CAATTCCCTGCAGAGAAGATGCTTTCATGGATCTCACTTCAAGATTACATAGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCTGGTTGCCTTCGCTACTCCTCAATGCCAAGCAGGTTCTCAAAAAGCAAGCTCAATCTGATGTTCCAAAAGGTCATATTGCAGTTTATGTCGGAGAAATCCA
AAGGAAGCGGTTTTTAGTTCCGTTATCGTACTTGAACCATCCTACATTCATGGCTTTGCTTAAGAGGGCTGAGGAAGAGTTTGGATACAATCATCCAATGGGGGGTTTGA
CAATTCCCTGCAGAGAAGATGCTTTCATGGATCTCACTTCAAGATTACATAGTTCTTGA
Protein sequenceShow/hide protein sequence
MGIWLPSLLLNAKQVLKKQAQSDVPKGHIAVYVGEIQRKRFLVPLSYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS