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Lsi10G004560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr10:6633304..6633597
RNA-Seq ExpressionLsi10G004560
SyntenyLsi10G004560
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571050.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4594.85Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQILK QA+STRNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGF HPMGGL+IPCREDAFINLTARLHRS
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]1.2e-4593.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

XP_022986736.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]2.7e-4593.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSIL NAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGL+IPCREDAFINLT RLHRS
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

XP_038901157.1 auxin-responsive protein SAUR21-like [Benincasa hispida]2.7e-4592.78Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLN+SEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

XP_038901158.1 auxin-responsive protein SAUR21-like [Benincasa hispida]7.9e-4590.72Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFV+PISYLKHPSFVDLLNRSEEEFGFCHPMGGL+IPCRED FINLTAR+H S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

TrEMBL top hitse value%identityAlignment
A0A1S4E2E4 auxin-responsive protein SAUR21-like5.0e-4592.78Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGL+IPCREDAFINLTA+LH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like5.0e-4592.78Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGL+IPCREDAFINLTA+LH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

A0A5D3BIN4 Auxin-responsive protein SAUR21-like1.5e-4491.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKG+IA+YVGEIQRKRFVVPISYLKHPSFVDLL RSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

A0A6J1CYI0 auxin-responsive protein SAUR21-like5.0e-4592.78Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSILLNAKQILKMQA+S RNQSDVPKG+IA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGL+IPCREDAFINLT+RLH S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

A0A6J1JC36 auxin-responsive protein SAUR21-like1.3e-4593.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        MGIRLPSIL NAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGL+IPCREDAFINLT RLHRS
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.8e-2462.07Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH
        LL AK+IL   A +    S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH

Q9FJF7 Auxin-responsive protein SAUR221.0e-2361.63Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL
        LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SE+EFGF HPMGGL+IPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL

Q9FJG0 Auxin-responsive protein SAUR202.8e-2462.5Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHR
        LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VPISYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+R  R
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHR

Q9FJG1 Auxin-responsive protein SAUR193.6e-2462.79Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL
        LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL

Q9FK62 Auxin-responsive protein SAUR248.0e-2462.79Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL
        LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.0e-2655.1Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGE-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS
        M IR+  +L ++KQ+LK  + S+ N + +PKGH+A+YVGE +Q++RFVVP++YL HP F  LL ++EEEFGF HPMGGL+IPC E  FI+L +RL  S
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGE-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

AT4G34810.1 SAUR-like auxin-responsive protein family5.2e-2654.46Show/hide
Query:  MGIRLPSILLNAKQILKMQAVSTRNQSD------VPKGHIAIYVG---EIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLT
        MG+   +I    KQILK+ +++ RN++       VPKGH+A+YVG   E+++KRFVVPIS+L HPSF + L+R+EEEFGF HPMGGL+IPCRE+ F++L 
Subjt:  MGIRLPSILLNAKQILKMQAVSTRNQSD------VPKGHIAIYVG---EIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLT

Query:  A
        A
Subjt:  A

AT4G38840.1 SAUR-like auxin-responsive protein family2.7e-2755.56Show/hide
Query:  MGIRLPSILLNAKQILK----MQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH
        M IR+P +L ++KQIL+    + + S+ +  DVPKG++A+YVGE   KRFVVP+SYL  PSF DLL ++EEEFGF HPMGGL+IPC E+ FI+L +R +
Subjt:  MGIRLPSILLNAKQILK----MQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH

AT5G18020.1 SAUR-like auxin-responsive protein family2.0e-2562.5Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHR
        LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VPISYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+R  R
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHR

AT5G18060.1 SAUR-like auxin-responsive protein family2.0e-2562.07Show/hide
Query:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH
        LL AK+IL   A +    S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGL+IPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTGTGTCAACCAGAAATCAGTCTGATGTTCCCAAAGGTCATATTGCAATTTA
TGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATTTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAATGGGCGGCTTGTCAATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACAGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTGTGTCAACCAGAAATCAGTCTGATGTTCCCAAAGGTCATATTGCAATTTA
TGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATTTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAATGGGCGGCTTGTCAATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACAGATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS