; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G004710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G004710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFlocculation protein FLO11-like
Genome locationchr10:6823007..6851626
RNA-Seq ExpressionLsi10G004710
SyntenyLsi10G004710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS87991.1 Os04g0184450, partial [Oryza sativa Japonica Group]6.5e-1263.24Show/hide
Query:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM
        + YP  SC   IG TPARLVRPTVGL+PTTE    G  IDPSVSVPS TA +FAA   AEPLL+  G+
Subjt:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM

KAB8094899.1 hypothetical protein EE612_022344, partial [Oryza sativa]6.5e-1263.24Show/hide
Query:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM
        + YP  SC   IG TPARLVRPTVGL+PTTE    G  IDPSVSVPS TA +FAA   AEPLL+  G+
Subjt:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM

KAF7837068.1 Uncharacterized protein G2W53_005550 [Senna tora]1.8e-1474.58Show/hide
Query:  EIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP
        EIG TP+ LVRPTVGLMPT ELK EGH ++PSVSVP E  TIFAATD+A+PLL+PQG+P
Subjt:  EIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP

KAG5578352.1 hypothetical protein H5410_058486 [Solanum commersonii]3.5e-1358.75Show/hide
Query:  SNPFFDSVANLKQINYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQG
        S PF  S  N   I  PI +C  EIG TPA LVRPTVGL+PTTEL ++G  ++P+VSVP+ TA +FAATD+AEP+L+P G
Subjt:  SNPFFDSVANLKQINYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQG

MCI18393.1 hypothetical protein [Trifolium medium]5.5e-1976.12Show/hide
Query:  YPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP
        YP  SCL  IGTTPA LVRPTVGLMPTTELK+EGH ++PSVSVPS+T T FAATD+A+PLLEP G+P
Subjt:  YPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP

TrEMBL top hitse value%identityAlignment
A0A0P0W6Y7 Os04g0183401 protein (Fragment)2.0e-1167.21Show/hide
Query:  SCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQG
        SCL E+G TPARLV PTVGL+PTTE    G +IDPSVSVPS TA +FAA   A PLL+P G
Subjt:  SCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQG

A0A0P0W758 Os04g0184450 protein (Fragment)3.2e-1263.24Show/hide
Query:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM
        + YP  SC   IG TPARLVRPTVGL+PTTE    G  IDPSVSVPS TA +FAA   AEPLL+  G+
Subjt:  INYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGM

A0A392Q1W0 Uncharacterized protein (Fragment)2.7e-1976.12Show/hide
Query:  YPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP
        YP  SCL  IGTTPA LVRPTVGLMPTTELK+EGH ++PSVSVPS+T T FAATD+A+PLLEP G+P
Subjt:  YPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMP

F2CVT6 Predicted protein1.3e-1047.52Show/hide
Query:  FLPLRMSKRKKWRLYSERADMAARKRTRSPIASLKQIDYPTVSCLKEIGTTPARLVRPTVGLMPTTELRVEGHNIDPSVSVPSETVTILAATDMAEPLLE
        F+ +R+ K+KK   Y ++       R R        I YPTVSC   +G TPARLV P VGLMPTTEL  +G +++PSVSVPS T  +LAA    EP L+
Subjt:  FLPLRMSKRKKWRLYSERADMAARKRTRSPIASLKQIDYPTVSCLKEIGTTPARLVRPTVGLMPTTELRVEGHNIDPSVSVPSETVTILAATDMAEPLLE

Query:  P
        P
Subjt:  P

J3LVT1 Uncharacterized protein3.2e-1257.14Show/hide
Query:  IASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMPCNGDKVIGAFLL
        + SCL E+G TPARLV PTVGL+PTTE    G +IDPSVSVPS TA +FAA   A+PLL+P G   + D   G F++
Subjt:  IASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMPCNGDKVIGAFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTATAACTGTTACATTATAACCCACAATGGCATCACCAACGGCGTTAAACCAATAAGTCCTTGCCAGAGCATAGCCACGAGCGAACCGGAAAACCCCCGTCCCTC
CGACCACCGGCAACTCACGAACGGTATGCATCACCGAATTCTTCCCCAAAACAACAATGGAGCTGCCGTTGAACTCGCCGGCGGTGAATTCGTTAATGCCATCATTAGGC
CCAGCTCCTGCTGTCCGGCGGATCCGTACAGCCCCTGTGCTCGCCCCACCTCCTTCGATTTCGGGTCCGGTGATTCTGTCAATGGATCGTCGGCGATGAACACGGAACCG
AAGAGCGTCGGCGATTTTCCGGTGGTTGGGGCCTCGGCAACCTTGACGGCTGAGGGGGTTTTCCCGCTGATGGTGTCGTGGAATTGTAACAAGGAAAATGGAGTCATAGG
AGGATTATTTTTCCCACCCAATCCAATGAGGGGCAAAATTGCACATGGTAGGAACAACAACTCAACTCAACAAGGCAGCTTCGCAAACCCTCGAGCCATCTTAAACTTCC
CTCTCCCGCCGACAACCGCCACCTCCCGTTTCGACTCCGTCACCGGATTCCTCGAAAACACGCTGATGGAGCTGCCGTTGTACTTCCCGGTTGTGAAACCCCCTCGCGCG
TTGCCGATCACTTTCGAATTCGGATCGGGTCCCTCCCGTAGCGGGTCGTCGACGGCGTACACGCTGCCGAATCGAGTCGCCGACTGGTCGCCTATGGTGATGTTTGAGTG
CCCCACTTCGACGGCGCTGGGTTTTTTGCCGCTCAGGATGTCGAAAAGGAAGAAATGGAGATTGTACTCGGAACGCGCAGATATGGCGGCGAGGAAGAGGACAAGAAGCC
CGATCGCTAGCCTGAAACAAATTGATTACCCGACAGTGTCCTGCCTCAAAGAAATCGGGACAACCCCTGCTCGACTGGTGAGACCTACTGTGGGTTTAATGCCAACTACT
GAATTGAGAGTTGAAGGGCATAATATTGATCCATCGGTTTCAGTTCCCAGTGAAACCGTAACCATATTGGCGGCAACGGATATGGCAGAGCCGCTACTTGAGCCACAAGA
TTCTTTCTTATGTGATTTCACTTACAAGAAGACAATTATTGAAGAAGTTGGAAAAGTTTCACACCTTTCCTTGGCCACCCCTAGCGCTCCAACCATTGGGTGGTTCATAG
GACCTGAAATCAGACCACTCGCTCAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTGGTCACCACCCCTGCATCACGAGGAACAATAGAGCCAAGCAA
AGCAAAAGAGCCAGCCGTTGTATTGAGCTTATCCCTGGTTGCAATAATGGGGTTAAATCTACGCACTTGTTTGAGGTAAAACTCGACAAGTTGCCTGGAGGTGAGTTTGT
TTTGGTAGAAAGCAAGTTGGAGATCTTTCACAGTTGCTTCTTCAATGGGGAAGTCAGTGTCAAAGCTGCAACTCCCGGAACTCCTTCAGGGTCATATCCAGCTGGTACAC
TAATTCCAGGAAAACCTCCAATTGCAAGAACAGGAGATATTGCCCAACCAGGAGCTGCTATTGCATCAAGCTTATTCTTAATCATTACTCTCTCAAATCCCTTTTTTGAC
AGTGTTGCTAATCTGAAACAAATTAATTACCCAATAGCATCCTGCCTCAAAGAGATTGGAACAACCCCTGCTCGACTGGTGAGACCTACTGTTGGCCTAATGCCAACTAC
TGAATTGAAAGTAGAAGGGCATAATATTGATCCATCAGTGTCAGTTCCTAGTGAAACTGCAACCATATTTGCTGCAACAGATATGGCAGAGCCGCTACTCGAGCCACAAG
GAATGCCATGCAATGGAGACAAAGTGATCGGGGCGTTTCTCTTGCGCTCGAGGTCGGCTCGAGAGGCTTGGTGTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGA
ATGGGGTTAAATCTACGCACTTGTTTGAGGGACAGTAATTCCAGGGTATCCTCCGATCGCCAGCACCGAAACACAGCCAGATCCCGGTATAAACTTGGAGCCATGGCTTG
TGGCCTCACTATCTCTTGGATCAAAACCAACAATCGCATCAAGCACATAAACTGCATCCGATACTGTTCTGGCTATAGGCCTGCATATGCAATTCCATTACGTTTTAGGA
AAATTTCTGGATCCACCCTGCACCGAAGTATCGACTTACCCAACTGTGTCGTGATGAGACATGATGGGAATGACTCCAGCTCGGGTAGTGAGGCCGACTGTCGGTTTGAA
TCCTACGACGGAGTTGTGATCGGAGGGACAGAGGATGGAGCCATGAGTTTCAGTGCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTATAACTGTTACATTATAACCCACAATGGCATCACCAACGGCGTTAAACCAATAAGTCCTTGCCAGAGCATAGCCACGAGCGAACCGGAAAACCCCCGTCCCTC
CGACCACCGGCAACTCACGAACGGTATGCATCACCGAATTCTTCCCCAAAACAACAATGGAGCTGCCGTTGAACTCGCCGGCGGTGAATTCGTTAATGCCATCATTAGGC
CCAGCTCCTGCTGTCCGGCGGATCCGTACAGCCCCTGTGCTCGCCCCACCTCCTTCGATTTCGGGTCCGGTGATTCTGTCAATGGATCGTCGGCGATGAACACGGAACCG
AAGAGCGTCGGCGATTTTCCGGTGGTTGGGGCCTCGGCAACCTTGACGGCTGAGGGGGTTTTCCCGCTGATGGTGTCGTGGAATTGTAACAAGGAAAATGGAGTCATAGG
AGGATTATTTTTCCCACCCAATCCAATGAGGGGCAAAATTGCACATGGTAGGAACAACAACTCAACTCAACAAGGCAGCTTCGCAAACCCTCGAGCCATCTTAAACTTCC
CTCTCCCGCCGACAACCGCCACCTCCCGTTTCGACTCCGTCACCGGATTCCTCGAAAACACGCTGATGGAGCTGCCGTTGTACTTCCCGGTTGTGAAACCCCCTCGCGCG
TTGCCGATCACTTTCGAATTCGGATCGGGTCCCTCCCGTAGCGGGTCGTCGACGGCGTACACGCTGCCGAATCGAGTCGCCGACTGGTCGCCTATGGTGATGTTTGAGTG
CCCCACTTCGACGGCGCTGGGTTTTTTGCCGCTCAGGATGTCGAAAAGGAAGAAATGGAGATTGTACTCGGAACGCGCAGATATGGCGGCGAGGAAGAGGACAAGAAGCC
CGATCGCTAGCCTGAAACAAATTGATTACCCGACAGTGTCCTGCCTCAAAGAAATCGGGACAACCCCTGCTCGACTGGTGAGACCTACTGTGGGTTTAATGCCAACTACT
GAATTGAGAGTTGAAGGGCATAATATTGATCCATCGGTTTCAGTTCCCAGTGAAACCGTAACCATATTGGCGGCAACGGATATGGCAGAGCCGCTACTTGAGCCACAAGA
TTCTTTCTTATGTGATTTCACTTACAAGAAGACAATTATTGAAGAAGTTGGAAAAGTTTCACACCTTTCCTTGGCCACCCCTAGCGCTCCAACCATTGGGTGGTTCATAG
GACCTGAAATCAGACCACTCGCTCAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTGGTCACCACCCCTGCATCACGAGGAACAATAGAGCCAAGCAA
AGCAAAAGAGCCAGCCGTTGTATTGAGCTTATCCCTGGTTGCAATAATGGGGTTAAATCTACGCACTTGTTTGAGGTAAAACTCGACAAGTTGCCTGGAGGTGAGTTTGT
TTTGGTAGAAAGCAAGTTGGAGATCTTTCACAGTTGCTTCTTCAATGGGGAAGTCAGTGTCAAAGCTGCAACTCCCGGAACTCCTTCAGGGTCATATCCAGCTGGTACAC
TAATTCCAGGAAAACCTCCAATTGCAAGAACAGGAGATATTGCCCAACCAGGAGCTGCTATTGCATCAAGCTTATTCTTAATCATTACTCTCTCAAATCCCTTTTTTGAC
AGTGTTGCTAATCTGAAACAAATTAATTACCCAATAGCATCCTGCCTCAAAGAGATTGGAACAACCCCTGCTCGACTGGTGAGACCTACTGTTGGCCTAATGCCAACTAC
TGAATTGAAAGTAGAAGGGCATAATATTGATCCATCAGTGTCAGTTCCTAGTGAAACTGCAACCATATTTGCTGCAACAGATATGGCAGAGCCGCTACTCGAGCCACAAG
GAATGCCATGCAATGGAGACAAAGTGATCGGGGCGTTTCTCTTGCGCTCGAGGTCGGCTCGAGAGGCTTGGTGTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGA
ATGGGGTTAAATCTACGCACTTGTTTGAGGGACAGTAATTCCAGGGTATCCTCCGATCGCCAGCACCGAAACACAGCCAGATCCCGGTATAAACTTGGAGCCATGGCTTG
TGGCCTCACTATCTCTTGGATCAAAACCAACAATCGCATCAAGCACATAAACTGCATCCGATACTGTTCTGGCTATAGGCCTGCATATGCAATTCCATTACGTTTTAGGA
AAATTTCTGGATCCACCCTGCACCGAAGTATCGACTTACCCAACTGTGTCGTGATGAGACATGATGGGAATGACTCCAGCTCGGGTAGTGAGGCCGACTGTCGGTTTGAA
TCCTACGACGGAGTTGTGATCGGAGGGACAGAGGATGGAGCCATGAGTTTCAGTGCCGAGTGA
Protein sequenceShow/hide protein sequence
MMYNCYIITHNGITNGVKPISPCQSIATSEPENPRPSDHRQLTNGMHHRILPQNNNGAAVELAGGEFVNAIIRPSSCCPADPYSPCARPTSFDFGSGDSVNGSSAMNTEP
KSVGDFPVVGASATLTAEGVFPLMVSWNCNKENGVIGGLFFPPNPMRGKIAHGRNNNSTQQGSFANPRAILNFPLPPTTATSRFDSVTGFLENTLMELPLYFPVVKPPRA
LPITFEFGSGPSRSGSSTAYTLPNRVADWSPMVMFECPTSTALGFLPLRMSKRKKWRLYSERADMAARKRTRSPIASLKQIDYPTVSCLKEIGTTPARLVRPTVGLMPTT
ELRVEGHNIDPSVSVPSETVTILAATDMAEPLLEPQDSFLCDFTYKKTIIEEVGKVSHLSLATPSAPTIGWFIGPEIRPLAQARFPKDNCTCLPQLGHHPCITRNNRAKQ
SKRASRCIELIPGCNNGVKSTHLFEVKLDKLPGGEFVLVESKLEIFHSCFFNGEVSVKAATPGTPSGSYPAGTLIPGKPPIARTGDIAQPGAAIASSLFLIITLSNPFFD
SVANLKQINYPIASCLKEIGTTPARLVRPTVGLMPTTELKVEGHNIDPSVSVPSETATIFAATDMAEPLLEPQGMPCNGDKVIGAFLLRSRSAREAWCKASGFTSMIPFR
MGLNLRTCLRDSNSRVSSDRQHRNTARSRYKLGAMACGLTISWIKTNNRIKHINCIRYCSGYRPAYAIPLRFRKISGSTLHRSIDLPNCVVMRHDGNDSSSGSEADCRFE
SYDGVVIGGTEDGAMSFSAE