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Lsi10G005120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:7303606..7304227
RNA-Seq ExpressionLsi10G005120
SyntenyLsi10G005120
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000421 - autophagosome membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62004.2 hypothetical protein Csa_005914 [Cucumis sativus]2.9e-2071.59Show/hide
Query:  DDSDKPLDASETLLLEIVEKGAVTGGRRREHGLKVGQGGVFDEGVLDGEFVPGGGDGGGGGRRGGVREEVFETGVGLKRGHFD-VGEF
        DD  +PLDA++T+LLE  EKG V GG   EHGLKVG+GGVFD+ VLDGE V G G GGG GRR GV EEVFE GVGLKRGHFD VGEF
Subjt:  DDSDKPLDASETLLLEIVEKGAVTGGRRREHGLKVGQGGVFDEGVLDGEFVPGGGDGGGGGRRGGVREEVFETGVGLKRGHFD-VGEF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGTTTTCTGTTTCTATCCGCCAGTCAACTGGAAGCTTCATCGGAATCTAATATTCTCCGTCGACGATTACCACCGGCGGACTCCGGCGACGACAGCGACAAGCC
ACTCGATGCATCCGAAACCTTGCTTCTTGAGATTGTGGAAAAAGGTGCGGTCACCGGCGGCAGGCGGCGTGAGCATGGGCTGAAGGTAGGCCAAGGCGGCGTGTTTGACG
AGGGGGTTCTTGATGGGGAGTTCGTCCCAGGCGGTGGCGACGGCGGCGGAGGGGGGCGGCGAGGGGGAGTCCGAGAGGAGGTCTTTGAGACTGGTGTAGGATTGAAGAGG
GGTCATTTCGATGTCGGAGAATTCCAATTCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGTTTTCTGTTTCTATCCGCCAGTCAACTGGAAGCTTCATCGGAATCTAATATTCTCCGTCGACGATTACCACCGGCGGACTCCGGCGACGACAGCGACAAGCC
ACTCGATGCATCCGAAACCTTGCTTCTTGAGATTGTGGAAAAAGGTGCGGTCACCGGCGGCAGGCGGCGTGAGCATGGGCTGAAGGTAGGCCAAGGCGGCGTGTTTGACG
AGGGGGTTCTTGATGGGGAGTTCGTCCCAGGCGGTGGCGACGGCGGCGGAGGGGGGCGGCGAGGGGGAGTCCGAGAGGAGGTCTTTGAGACTGGTGTAGGATTGAAGAGG
GGTCATTTCGATGTCGGAGAATTCCAATTCCGATGA
Protein sequenceShow/hide protein sequence
MPRFLFLSASQLEASSESNILRRRLPPADSGDDSDKPLDASETLLLEIVEKGAVTGGRRREHGLKVGQGGVFDEGVLDGEFVPGGGDGGGGGRRGGVREEVFETGVGLKR
GHFDVGEFQFR