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Lsi10G005160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVQ domain-containing protein
Genome locationchr10:7375139..7375450
RNA-Seq ExpressionLsi10G005160
SyntenyLsi10G005160
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]1.4e-2669.16Show/hide
Query:  MESHSFSFHYSEP-EQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQ---GFASYNGFLG
        ME HSFSF+Y++      K  KKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPN++D    S   RD SG+   G  SY+GF  
Subjt:  MESHSFSFHYSEP-EQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQ---GFASYNGFLG

Query:  QYSSERY
          SSERY
Subjt:  QYSSERY

KAA8522582.1 hypothetical protein F0562_013057 [Nyssa sinensis]2.3e-1061.54Show/hide
Query:  SFHYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLS
        S H        KP KK +AP  PTPP++YKVD +NFR+VVQKLTAAPEFQ RRLQ++ PP  NLS
Subjt:  SFHYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLS

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]8.2e-2467.31Show/hide
Query:  MESHSFSFHY-SEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYS
        ME HSFSF+Y  +     K  KK VAPPRP+PPQVYKVDPINFRDVVQKLTAAP+FQDRRLQAMPPPRP+L+D    S   RD SG+G   +  FLGQ S
Subjt:  MESHSFSFHY-SEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYS

Query:  SERY
        S RY
Subjt:  SERY

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1866.27Show/hide
Query:  SHSFSFHYSEPEQAHK----PPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRR
        S SFSF+YS+P+  HK     PKKAVAPP P PP+VYKV+PI FRDVVQKLT+ PE+ D RL+AMP PRPNLS+ PPP   RR
Subjt:  SHSFSFHYSEPEQAHK----PPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRR

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]3.6e-1962.11Show/hide
Query:  HYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY
        H S    A KP  +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQAMP PRP+    PP S    DFSG+G   Y G+ G   SERY
Subjt:  HYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY

TrEMBL top hitse value%identityAlignment
A0A0A0LPS3 VQ domain-containing protein5.4e-2172.09Show/hide
Query:  KPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY
        K  KK VAPPRP+PPQVYKVDPINFRDVVQKLTAAP+FQDRRLQAMPPPRP+L+D    S   RD SG+G   +  FLGQ SS RY
Subjt:  KPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY

A0A2N9FPV7 VQ domain-containing protein1.1e-1061.9Show/hide
Query:  KPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDR
        KP KK VAP  PTPP++YKVDPINFRD+VQKLT A EFQ +RLQ++ PP  N+S+  P   +R
Subjt:  KPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDR

A0A5A7TW54 VQ motif-containing protein 296.6e-2769.16Show/hide
Query:  MESHSFSFHYSEP-EQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQ---GFASYNGFLG
        ME HSFSF+Y++      K  KKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPN++D    S   RD SG+   G  SY+GF  
Subjt:  MESHSFSFHYSEP-EQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQ---GFASYNGFLG

Query:  QYSSERY
          SSERY
Subjt:  QYSSERY

A0A5J4ZYQ3 VQ domain-containing protein1.1e-1061.54Show/hide
Query:  SFHYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLS
        S H        KP KK +AP  PTPP++YKVD +NFR+VVQKLTAAPEFQ RRLQ++ PP  NLS
Subjt:  SFHYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLS

A0A6J1D7B4 VQ motif-containing protein 291.7e-1962.11Show/hide
Query:  HYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY
        H S    A KP  +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQAMP PRP+    PP S    DFSG+G   Y G+ G   SERY
Subjt:  HYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCACTCTTTTTCTTTTCACTACTCCGAGCCGGAGCAAGCTCACAAGCCGCCCAAGAAGGCGGTGGCTCCTCCGCGGCCGACGCCACCCCAGGTTTACAAGGT
CGACCCAATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGCCGCCTTCAAGCTATGCCGCCTCCACGCCCCAATCTCTCCGATCTGC
CGCCGCCTTCTGTTGACCGCCGGGATTTCTCTGGCCAGGGCTTTGCTTCTTACAATGGTTTCTTGGGACAGTACTCCTCTGAGAGATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTCACTCTTTTTCTTTTCACTACTCCGAGCCGGAGCAAGCTCACAAGCCGCCCAAGAAGGCGGTGGCTCCTCCGCGGCCGACGCCACCCCAGGTTTACAAGGT
CGACCCAATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGCCGCCTTCAAGCTATGCCGCCTCCACGCCCCAATCTCTCCGATCTGC
CGCCGCCTTCTGTTGACCGCCGGGATTTCTCTGGCCAGGGCTTTGCTTCTTACAATGGTTTCTTGGGACAGTACTCCTCTGAGAGATATTAG
Protein sequenceShow/hide protein sequence
MESHSFSFHYSEPEQAHKPPKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRPNLSDLPPPSVDRRDFSGQGFASYNGFLGQYSSERY