; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein
Genome locationchr10:7559733..7563911
RNA-Seq ExpressionLsi10G005300
SyntenyLsi10G005300
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsIPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99507.1 F-box protein [Cucumis melo var. makuwa]6.9e-9781.66Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        ME   EIDRLPID+LADIFAMITYF+DLAQ         A GVC+KWK+GV+MSIGRRKSLSFAGWKM DDSTARLIRHE+SLRELD SRS WGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GLN+ISLAKCIPNLKSISLWGM           ISRANSL NLNIGGTYITDIS+LAIA+NCPNLKTIVLWCCR VTESGLLILV KC KLESINVWAMR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMWV
        VPVDCF+GLVAISPSLQIKSRSVLDS WV
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMWV

XP_004149695.1 F-box protein At5g67140 [Cucumis sativus]1.6e-9881.58Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMIT FTDLAQ         ACGVC+KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGC ITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIAD+CPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VPVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

XP_008457759.1 PREDICTED: F-box protein At5g67140 [Cucumis melo]4.3e-9982.02Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMIT FTDLAQ         ACGVC+KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIAD+CPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VPVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

XP_038902095.1 F-box protein At5g67140-like [Benincasa hispida]2.4e-9781.06Show/hide
Query:  ELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDHG
        E EPEIDRLPID+LA IFAMIT FTDLAQ         ACGV +KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGCQITDHG
Subjt:  ELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDHG

Query:  LNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMRV
        L+EISLAKCIPNL+SISLWGM           ISRANSL NLNIGGT++TD+S+ AIADNCPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MRV
Subjt:  LNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMRV

Query:  PVDCFIGLVAISPSLQIKSRSVLDSMW
        PVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  PVDCFIGLVAISPSLQIKSRSVLDSMW

XP_038902841.1 F-box protein At5g67140 isoform X3 [Benincasa hispida]2.0e-10486.4Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEP I+RLPID+LADIFAMITYFTDLAQ S         GVCKKWKEGVKMSIGRRKSLSFAGWK+DDDSTARLIRHEY+LR+LDISRSRWGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGTYITDISVLAIA+NCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VP+DCFIGLVAISPSLQIKSRSVLDSMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

TrEMBL top hitse value%identityAlignment
A0A0A0LPU5 F-box domain-containing protein8.0e-9981.58Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMIT FTDLAQ         ACGVC+KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGC ITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIAD+CPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VPVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

A0A1S4E1P2 F-box protein At5g671402.1e-9982.02Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMIT FTDLAQ         ACGVC+KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIAD+CPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VPVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

A0A5D3BK56 F-box protein3.3e-9781.66Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        ME   EIDRLPID+LADIFAMITYF+DLAQ         A GVC+KWK+GV+MSIGRRKSLSFAGWKM DDSTARLIRHE+SLRELD SRS WGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GLN+ISLAKCIPNLKSISLWGM           ISRANSL NLNIGGTYITDIS+LAIA+NCPNLKTIVLWCCR VTESGLLILV KC KLESINVWAMR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMWV
        VPVDCF+GLVAISPSLQIKSRSVLDS WV
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMWV

A0A5D3BMX7 F-box protein2.1e-9982.02Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMIT FTDLAQ         ACGVC+KWKEGVK+S+GRRKSLSFAGWKMDD+STARLIRH YSLRELDISRSRWGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIAD+CPNLKTIVLW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVLDSMW
        VPVDCFIGLVAISPSLQIKSRS+L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRSVLDSMW

A0A6J1G699 F-box protein At5g671401.1e-9579.91Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        MELEPEIDRLPID+LA IFAMI  FTDLAQ         ACGVC+KWKEGVK+S+GRR+SLSFAGWKMDD STARLI H YSLR+LDISRSRWGCQITDH
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL+EISLAKCIPNLKSISLWGM           ISRANSL NLNIGGT++TD+S+ AIADNCPNLKTI LW CRHVTE+GLLILVSKCRKLESINVW MR
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRS-VLDSMW
        VPVDCFIGLVAISPSLQIKSRS +L+SMW
Subjt:  VPVDCFIGLVAISPSLQIKSRS-VLDSMW

SwissProt top hitse value%identityAlignment
O49286 F-box protein SKP2B3.4e-0627.27Show/hide
Query:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN
        +++D++   +  H + L++LD+S+S    +ITDH L   SLA+   NL  ++L G  S +++           L  LN+ G    ++D ++ AI +NC  
Subjt:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN

Query:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV
        L+++ L  C ++++ G++ L   C  L ++++
Subjt:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV

Q8BH70 F-box/LRR-repeat protein 41.0e-0531.25Show/hide
Query:  LKSISLWGMISRANSLHNLNIGG-TYITDISVLA--IADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINV-W--AMRVPVDCFIGLVAISPSLQ-
        ++  +L  +++    L +L++G    I D  V+A  I   C NL+T+ LW C+++TE+G+  L S C  LE +++ W   ++    CF+ L    P+LQ 
Subjt:  LKSISLWGMISRANSLHNLNIGG-TYITDISVLA--IADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINV-W--AMRVPVDCFIGLVAISPSLQ-

Query:  ---IKSRSVLDS
             +RSV D+
Subjt:  ---IKSRSVLDS

Q9C5D2 F-box/LRR-repeat protein 41.7e-0529.66Show/hide
Query:  LNEISLAKCIPNLKSISLWGMISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRK-LESINVWAMRVPVDCFIGLVA
        +  +SL  C PN+ S+ L  +  +  SL +L++ G Y+ D  + A+   C  L+ + L  C  +T+ G++ LV  C K L+SI V A     D  + L A
Subjt:  LNEISLAKCIPNLKSISLWGMISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRK-LESINVWAMRVPVDCFIGLVA

Query:  ISPSLQIKSRSVLDSMWV
        +    ++     LDS ++
Subjt:  ISPSLQIKSRSVLDSMWV

Q9FH99 F-box protein At5g671406.1e-7260.27Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        M+ E  IDRLP+D+LA IF++ T FT LAQ S         GVCKKW++ V  S+ RR++LSFAGWKMDDDST+RL+   ++L+ELDISRSRWGC ITD+
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL +I+ A+C+ NL S+SLWGM           ISR +SL +LNIGGT+ITD S+ AIA+ C  LKTI +WCCRHVTE GLL+LV+KCRKLESIN+W  R
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVL
        VPVDCFI L+ ISP+LQIK   +L
Subjt:  VPVDCFIGLVAISPSLQIKSRSVL

Q9SKK0 EIN3-binding F-box protein 14.5e-0632.35Show/hide
Query:  QITDHGLNEISLAKCIPNLKSISLW--------GMISRAN---SLHNLNIGG-TYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI
        +++D GL   S+ +  P+L S+SLW        G++  A     L  L +   + ITD  ++AIA +CPNL  + L  C  + + GLL +   C KL+S+
Subjt:  QITDHGLNEISLAKCIPNLKSISLW--------GMISRAN---SLHNLNIGG-TYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI

Query:  NV
        ++
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT1G77000.1 RNI-like superfamily protein2.4e-0727.27Show/hide
Query:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN
        +++D++   +  H + L++LD+S+S    +ITDH L   SLA+   NL  ++L G  S +++           L  LN+ G    ++D ++ AI +NC  
Subjt:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN

Query:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV
        L+++ L  C ++++ G++ L   C  L ++++
Subjt:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV

AT1G77000.2 RNI-like superfamily protein2.4e-0727.27Show/hide
Query:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN
        +++D++   +  H + L++LD+S+S    +ITDH L   SLA+   NL  ++L G  S +++           L  LN+ G    ++D ++ AI +NC  
Subjt:  KMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKCIPNLKSISLWGMISRANS-----------LHNLNIGGTY--ITDISVLAIADNCPN

Query:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV
        L+++ L  C ++++ G++ L   C  L ++++
Subjt:  LKTIVLWCCRHVTESGLLILVSKCRKLESINV

AT2G25490.1 EIN3-binding F box protein 13.2e-0732.35Show/hide
Query:  QITDHGLNEISLAKCIPNLKSISLW--------GMISRAN---SLHNLNIGG-TYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI
        +++D GL   S+ +  P+L S+SLW        G++  A     L  L +   + ITD  ++AIA +CPNL  + L  C  + + GLL +   C KL+S+
Subjt:  QITDHGLNEISLAKCIPNLKSISLW--------GMISRAN---SLHNLNIGG-TYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI

Query:  NV
        ++
Subjt:  NV

AT5G23340.1 RNI-like superfamily protein1.9e-0724.24Show/hide
Query:  ELEPEIDRLPIDVLADIFAMI------TYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGC
        EL   + RL  D   ++F ++         TD  +++          +  ++ + V++ + +  S SF     D D  A +      LR L++   +   
Subjt:  ELEPEIDRLPIDVLADIFAMI------TYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGC

Query:  QITDHGLNEISLAKCIPNL--------KSISLWGMISRANSLHNLN----IGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI
         ITD GL   S+ +C+  L        + +S  G+ + A   H+L      G  +ITD S+ ++++ C +L+ + L  C ++T+SGL  LV  CRK++S+
Subjt:  QITDHGLNEISLAKCIPNL--------KSISLWGMISRANSLHNLN----IGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESI

Query:  NVWAMRVPVDCFIGLVAISPSLQIKSRSVLD
        ++       D  +  VA + +  +K+  +LD
Subjt:  NVWAMRVPVDCFIGLVAISPSLQIKSRSVLD

AT5G67140.1 F-box/RNI-like superfamily protein4.3e-7360.27Show/hide
Query:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH
        M+ E  IDRLP+D+LA IF++ T FT LAQ S         GVCKKW++ V  S+ RR++LSFAGWKMDDDST+RL+   ++L+ELDISRSRWGC ITD+
Subjt:  MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDH

Query:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR
        GL +I+ A+C+ NL S+SLWGM           ISR +SL +LNIGGT+ITD S+ AIA+ C  LKTI +WCCRHVTE GLL+LV+KCRKLESIN+W  R
Subjt:  GLNEISLAKCIPNLKSISLWGM-----------ISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMR

Query:  VPVDCFIGLVAISPSLQIKSRSVL
        VPVDCFI L+ ISP+LQIK   +L
Subjt:  VPVDCFIGLVAISPSLQIKSRSVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGAGCCGGAGATTGATCGGTTGCCGATTGACGTACTGGCTGACATTTTTGCAATGATCACCTACTTCACCGATTTGGCTCAGGTTTCTGTGATTGGGGAAAA
ACGCAGGGCGTGCGGGGTTTGTAAGAAATGGAAGGAAGGAGTTAAAATGTCTATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGATTCCACTG
CTCGCCTTATTCGCCATGAATACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGAATGAAATCTCTCTTGCAAAGTGC
ATTCCCAACCTCAAGTCCATTTCACTTTGGGGTATGATTTCCAGAGCCAACTCCTTGCATAACCTGAACATAGGTGGCACTTATATCACAGATATATCTGTTCTTGCAAT
AGCAGATAACTGTCCAAATTTGAAGACCATTGTCCTCTGGTGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAA
ATGTCTGGGCAATGAGAGTTCCTGTAGATTGCTTCATCGGTTTGGTCGCAATAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTATGTGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
TGGAAAAGTGTTGGTGGAAATATGATGTCAACATCTTGCTTTTTTATGCTTATTTGTTCAAGCCCTTCAGCAAATTTCTTCTTCCAAATTGAAATACGAAGTGGAGAGCG
GAGTGGAATCGGTAGGGATGGAGTTGGAGCCGGAGATTGATCGGTTGCCGATTGACGTACTGGCTGACATTTTTGCAATGATCACCTACTTCACCGATTTGGCTCAGGTT
TCTGTGATTGGGGAAAAACGCAGGGCGTGCGGGGTTTGTAAGAAATGGAAGGAAGGAGTTAAAATGTCTATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGAT
GGATGATGATTCCACTGCTCGCCTTATTCGCCATGAATACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGAATGAAA
TCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCACTTTGGGGTATGATTTCCAGAGCCAACTCCTTGCATAACCTGAACATAGGTGGCACTTATATCACAGAT
ATATCTGTTCTTGCAATAGCAGATAACTGTCCAAATTTGAAGACCATTGTCCTCTGGTGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCG
CAAACTCGAGTCGATAAATGTCTGGGCAATGAGAGTTCCTGTAGATTGCTTCATCGGTTTGGTCGCAATAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATT
CTATGTGGGTGTAAAATATGTCACTTCAAGTAAAACCAAGAAGTGTTCTTGATTTTATGTAGCCTGTTGTGTGAAAAATATGCTCAAATATTTGCATCCTGTAAAGCTTC
TGTTGTATGTATGTATATATATATATTATATATATGCCTTCATCTTTGTGTTTCCCCTCATTTCAGTCAAATATAGATTTGTCATAATTTCCCCAAGAAGGCTGATTATG
TTATTTTCAGTTTATTTCAAACCAAATTATACTCACTGAGTATGTAAAAACTAAGCTCGCTTATTTTGAGGCTAAATGTCTTTTTATCACTATAGTCTGATAAATACATT
TTCTGGAAGGT
Protein sequenceShow/hide protein sequence
MELEPEIDRLPIDVLADIFAMITYFTDLAQVSVIGEKRRACGVCKKWKEGVKMSIGRRKSLSFAGWKMDDDSTARLIRHEYSLRELDISRSRWGCQITDHGLNEISLAKC
IPNLKSISLWGMISRANSLHNLNIGGTYITDISVLAIADNCPNLKTIVLWCCRHVTESGLLILVSKCRKLESINVWAMRVPVDCFIGLVAISPSLQIKSRSVLDSMWV