; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1685)
Genome locationchr10:7855991..7857917
RNA-Seq ExpressionLsi10G005470
SyntenyLsi10G005470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012881 - Protein of unknown function DUF1685


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149707.1 uncharacterized protein LOC101213862 [Cucumis sativus]5.3e-7088.89Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSD
        +SE Y  PPPPP KA LIPT LY+Q SWSPDASREEAWQ RRKGRSKKERN+S+TAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSD
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSD

Query:  SISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        SISKS+N TAFSSPDRD +NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  SISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

XP_008457792.1 PREDICTED: uncharacterized protein LOC103497396 [Cucumis melo]3.4e-6987.73Show/hide
Query:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS
        +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDLEELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YS
Subjt:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS

Query:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        DSISK  N TAFSSPDRD +NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

XP_022947253.1 uncharacterized protein LOC111451175 [Cucurbita moschata]5.1e-6582.61Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS
        MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+ELKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YSDS
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS

Query:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        ISKS+ TTA SSPDRDS+NSPSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Subjt:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

XP_023521262.1 uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo]1.1e-6481.99Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS
        MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+ELKACLELGF F+S ELD+RL+NTLPAL LYHAVNK+YSDS
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS

Query:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        ISKS+ TTA SSPDRDS+NSPSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Subjt:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

XP_038902790.1 uncharacterized protein LOC120089408 [Benincasa hispida]5.0e-6890.32Show/hide
Query:  PPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSN
        P   P +KA LIPT LYKQRSWSPDASREEAWQRRKGRSKKER +SVTAEDLEELKACLELGFGFESPELDSRLSNT PAL LYHAVNKNY+DSISKS+N
Subjt:  PPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSN

Query:  TTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        TTAFSSPDRD LNSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  TTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ4 Uncharacterized protein2.6e-7088.89Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSD
        +SE Y  PPPPP KA LIPT LY+Q SWSPDASREEAWQ RRKGRSKKERN+S+TAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSD
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSD

Query:  SISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        SISKS+N TAFSSPDRD +NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  SISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

A0A1S3C5W7 uncharacterized protein LOC1034973961.7e-6987.73Show/hide
Query:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS
        +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDLEELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YS
Subjt:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS

Query:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        DSISK  N TAFSSPDRD +NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

A0A5A7TQF7 Membrane insertase YidC1.7e-6987.73Show/hide
Query:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS
        +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDLEELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YS
Subjt:  MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYS

Query:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        DSISK  N TAFSSPDRD +NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Subjt:  DSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

A0A6J1G638 uncharacterized protein LOC1114511752.5e-6582.61Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS
        MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+ELKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YSDS
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS

Query:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        ISKS+ TTA SSPDRDS+NSPSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Subjt:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

A0A6J1L6N5 uncharacterized protein LOC1114996612.1e-6481.37Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS
        MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+ELKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YS+S
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDS

Query:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST
        ISKS+ TTA SSPDRDS+NSPSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACS++NSST
Subjt:  ISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15590.1 Protein of unknown function (DUF1685)1.4e-2053.15Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAEDLEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNK
        MS H AP PP P         L KQ SWSPD SREEAW R+K +   +   R++SVT +D+EELK C ELGFGF  ESP+L+ RLS+T+PAL LY AV++
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAEDLEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNK

Query:  NYSDSISKSSN
         YS+ +S++S+
Subjt:  NYSDSISKSSN

AT2G15590.2 Protein of unknown function (DUF1685)3.5e-2747.88Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAEDLEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNK
        MS H AP PP P         L KQ SWSPD SREEAW R+K +   +   R++SVT +D+EELK C ELGFGF  ESP+L+ RLS+T+PAL LY AV++
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAEDLEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNK

Query:  NYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS
         YS+ +S+   T++F+S D +  NS     + +      G++ KT+K KL+QWA+VV  SV++SS
Subjt:  NYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS

AT3G50350.1 Protein of unknown function (DUF1685)2.2e-2150.41Show/hide
Query:  PPPPPQKAGLI---------PTGLYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTAEDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVN
        PPP     G++          T L KQ SWSPD  REEAW +R+  S+     R +S+T EDL+ELKA  ELGFGF SPE  D RLSNTLPAL LY AV 
Subjt:  PPPPPQKAGLI---------PTGLYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTAEDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVN

Query:  KNYSDSISKSSNTTAFSSPDRDS
        K+Y+D++S  S T++ S  D D+
Subjt:  KNYSDSISKSSNTTAFSSPDRDS

AT3G50350.2 Protein of unknown function (DUF1685)6.3e-2952.11Show/hide
Query:  LYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTAEDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDS
        L  Q SWSPD  REEAW +R+  S+     R +S+T EDL+ELKA  ELGFGF SPE  D RLSNTLPAL LY AV K+Y+D++S  S T++ S  D D+
Subjt:  LYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTAEDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDS

Query:  LNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNS
                SP      + ++P+TVKTKL+QWA+VVAC+V  S
Subjt:  LNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNS

AT4G33985.1 Protein of unknown function (DUF1685)1.9e-3351.52Show/hide
Query:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGR---SKKERNQSVTAEDLEELKACLELGFGFE--SPELDSRLSNTLPALGLYHAVNK
        MS+  AP   PP+        L KQ SWSPDA REEAW R+KG+    +  R++SVT EDLEELK C+ELGFGFE  SP+LD RLS TLPALGLY AVNK
Subjt:  MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGR---SKKERNQSVTAEDLEELKACLELGFGFE--SPELDSRLSNTLPALGLYHAVNK

Query:  NYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS
         YS  +S++S+ ++ +S   +S +S + +          G++P+T+K +L+QWAQVVACSVK  S
Subjt:  NYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGC
GTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGC
CGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTT
TCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACA
GTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAA
mRNA sequenceShow/hide mRNA sequence
CTCTTATTAACGGAAAAAAAGAAAAATCCAAAAAAAAAAAAAAGCCATAGAGCCCTCCGGCAAGGTCACCGGCCATCCGGCCATCCCCAACGGCGGGGCTGTGTCGGGTG
TCCCATCAAAACCCACATCCACCATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCG
CCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGA
GTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCA
AGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAG
ACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAAATAATAAATATCTTTAATTATTAACCACCATGGTTAATCTA
AACTAAACCATAGTTTCAAATTTGCAAATGGGC
Protein sequenceShow/hide protein sequence
MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAF
SSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST