; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr10:7982793..7998333
RNA-Seq ExpressionLsi10G005490
SyntenyLsi10G005490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]2.8e-1233.74Show/hide
Query:  NFDSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDRPI----TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKI
        N++ D  S  + +EKI  K       EK K K + + E ++ I    ++RKVSF SP+N+T+ F    AP  TLK  SPM             Q  KKK+
Subjt:  NFDSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDRPI----TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKI

Query:  YRIKSPPQEKAGEKAQQEIIVESPKDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKET------RTNEEDKKSIEADKGIPEEA-
        YR+KS   E+   +  ++   E     E  L VDLG +SPLSD   S P+      +  SPT S I+ +S  +         E+ KK    ++   EE  
Subjt:  YRIKSPPQEKAGEKAQQEIIVESPKDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKET------RTNEEDKKSIEADKGIPEEA-

Query:  FKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNNDTTS
        FK++L  WL++NNLRL    N          S F S  ND  S
Subjt:  FKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNNDTTS

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]2.2e-1235.57Show/hide
Query:  RRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPM-GPRAFYNQK-------EKKKIYRIKSP--------PQEKAGEKAQQEIIVESPKDQEIVLTVDLGPL
        +RKVSF SP++KT  +    AP   +K +SP+  P+    +K       + KK+YRIKSP         ++  G   + + I E  +     LTVDLGPL
Subjt:  RRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPM-GPRAFYNQK-------EKKKIYRIKSP--------PQEKAGEKAQQEIIVESPKDQEIVLTVDLGPL

Query:  SPLSDMVISSPDVVMDTDTQLSPTASYILMESKETRTNEEDKKSIEADKG---IPEEAFKKELRLWLQKNNLRLTTME-----NQEEPIYIVRS
        SP SD  +SSPD +  + +  SPT S I+ +S E     E+++  E +KG     EE FK++L  WL+ NNL+L  ++     N    +Y+ RS
Subjt:  SPLSDMVISSPDVVMDTDTQLSPTASYILMESKETRTNEEDKKSIEADKG---IPEEAFKKELRLWLQKNNLRLTTME-----NQEEPIYIVRS

KAA0063658.1 hypothetical protein E6C27_scaffold329G001730 [Cucumis melo var. makuwa]1.3e-1235.87Show/hide
Query:  TTNEKGKQKILVAEEGDRP------ITRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK--------EKKKIYRIKSPPQEKAGEKAQQEI
        T  +KGKQ   V    D P       T+RKVSF  P+N+T+++    AP   LK  SPMG      +         +KKK+YR+KS  ++  GE +Q   
Subjt:  TTNEKGKQKILVAEEGDRP------ITRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK--------EKKKIYRIKSPPQEKAGEKAQQEI

Query:  IVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKE---TRTNEE---DKKSIEADK-GIPEEAFKKELRLWLQKNNLRLT
          E  +D   E+ L +DLG +SPLSDM  SSP+    T +  +PT S I+ +S     T  +EE    K+ I+ D+    E +FK++L  WL++NNLRL+
Subjt:  IVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKE---TRTNEE---DKKSIEADK-GIPEEAFKKELRLWLQKNNLRLT

Query:  TMENQEEPIYIVRSSYFRSTNND
         + N          S+F ST +D
Subjt:  TMENQEEPIYIVRSSYFRSTNND

TYK11997.1 hypothetical protein E5676_scaffold1017G00010 [Cucumis melo var. makuwa]3.7e-1233.2Show/hide
Query:  DSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK------------EK
        D+D  S    TEKI  ++ +  T++K  +KI   +   +  PI T+RKVSF SP+N+T+++    AP   L   SPMG    Y +K            +K
Subjt:  DSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK------------EK

Query:  KKIYRIKSPPQEKAGEKAQQEIIVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPT---------ASYILMESKETRTNEEDKKSIEAD
        KK+YR+KS  ++  GE +Q     E  +D   E+   VDLG +SPL D   SSP+    T +  +PT         A+ I+ + +E    + + K  E D
Subjt:  KKIYRIKSPPQEKAGEKAQQEIIVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPT---------ASYILMESKETRTNEEDKKSIEAD

Query:  KGIPEEAFKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNND
            E +FK++L  WL++NNLRL+ + N          S+F ST  D
Subjt:  KGIPEEAFKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNND

TYK21648.1 hypothetical protein E5676_scaffold859G00100 [Cucumis melo var. makuwa]4.8e-1234.72Show/hide
Query:  TTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKIYRIKSPPQEKAGEKAQQEIIVESP
        T  +KGKQ I  +E   +  PI T+RKVSF SP+N+T+ F    AP  TLK  SPM             Q  KKK+YR+KS   E+   +  ++   E  
Subjt:  TTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKIYRIKSPPQEKAGEKAQQEIIVESP

Query:  KDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKETR-------TNEEDKKSIEADKGIPEEAFKKELRLWLQKNNLRLTTMENQEE
           E  L VDLG +SPLSD   S P+      +  SPT S I+ +S  +          ++ K+++  +    E +FK++L  WL++NNLRL    N   
Subjt:  KDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKETR-------TNEEDKKSIEADKGIPEEAFKKELRLWLQKNNLRLTTMENQEE

Query:  PIYIVRSSYFRSTNND
               S F S  ND
Subjt:  PIYIVRSSYFRSTNND

TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein1.0e-1235.57Show/hide
Query:  RRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPM-GPRAFYNQK-------EKKKIYRIKSP--------PQEKAGEKAQQEIIVESPKDQEIVLTVDLGPL
        +RKVSF SP++KT  +    AP   +K +SP+  P+    +K       + KK+YRIKSP         ++  G   + + I E  +     LTVDLGPL
Subjt:  RRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPM-GPRAFYNQK-------EKKKIYRIKSP--------PQEKAGEKAQQEIIVESPKDQEIVLTVDLGPL

Query:  SPLSDMVISSPDVVMDTDTQLSPTASYILMESKETRTNEEDKKSIEADKG---IPEEAFKKELRLWLQKNNLRLTTME-----NQEEPIYIVRS
        SP SD  +SSPD +  + +  SPT S I+ +S E     E+++  E +KG     EE FK++L  WL+ NNL+L  ++     N    +Y+ RS
Subjt:  SPLSDMVISSPDVVMDTDTQLSPTASYILMESKETRTNEEDKKSIEADKG---IPEEAFKKELRLWLQKNNLRLTTME-----NQEEPIYIVRS

A0A5A7V7V5 Uncharacterized protein6.1e-1335.87Show/hide
Query:  TTNEKGKQKILVAEEGDRP------ITRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK--------EKKKIYRIKSPPQEKAGEKAQQEI
        T  +KGKQ   V    D P       T+RKVSF  P+N+T+++    AP   LK  SPMG      +         +KKK+YR+KS  ++  GE +Q   
Subjt:  TTNEKGKQKILVAEEGDRP------ITRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK--------EKKKIYRIKSPPQEKAGEKAQQEI

Query:  IVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKE---TRTNEE---DKKSIEADK-GIPEEAFKKELRLWLQKNNLRLT
          E  +D   E+ L +DLG +SPLSDM  SSP+    T +  +PT S I+ +S     T  +EE    K+ I+ D+    E +FK++L  WL++NNLRL+
Subjt:  IVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKE---TRTNEE---DKKSIEADK-GIPEEAFKKELRLWLQKNNLRLT

Query:  TMENQEEPIYIVRSSYFRSTNND
         + N          S+F ST +D
Subjt:  TMENQEEPIYIVRSSYFRSTNND

A0A5D3CJ66 Uncharacterized protein1.8e-1233.2Show/hide
Query:  DSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK------------EK
        D+D  S    TEKI  ++ +  T++K  +KI   +   +  PI T+RKVSF SP+N+T+++    AP   L   SPMG    Y +K            +K
Subjt:  DSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFYNQK------------EK

Query:  KKIYRIKSPPQEKAGEKAQQEIIVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPT---------ASYILMESKETRTNEEDKKSIEAD
        KK+YR+KS  ++  GE +Q     E  +D   E+   VDLG +SPL D   SSP+    T +  +PT         A+ I+ + +E    + + K  E D
Subjt:  KKIYRIKSPPQEKAGEKAQQEIIVESPKD--QEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPT---------ASYILMESKETRTNEEDKKSIEAD

Query:  KGIPEEAFKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNND
            E +FK++L  WL++NNLRL+ + N          S+F ST  D
Subjt:  KGIPEEAFKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNND

A0A5D3DDN2 Uncharacterized protein2.3e-1234.72Show/hide
Query:  TTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKIYRIKSPPQEKAGEKAQQEIIVESP
        T  +KGKQ I  +E   +  PI T+RKVSF SP+N+T+ F    AP  TLK  SPM             Q  KKK+YR+KS   E+   +  ++   E  
Subjt:  TTNEKGKQKILVAEEGDR--PI-TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKIYRIKSPPQEKAGEKAQQEIIVESP

Query:  KDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKETR-------TNEEDKKSIEADKGIPEEAFKKELRLWLQKNNLRLTTMENQEE
           E  L VDLG +SPLSD   S P+      +  SPT S I+ +S  +          ++ K+++  +    E +FK++L  WL++NNLRL    N   
Subjt:  KDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKETR-------TNEEDKKSIEADKGIPEEAFKKELRLWLQKNNLRLTTMENQEE

Query:  PIYIVRSSYFRSTNND
               S F S  ND
Subjt:  PIYIVRSSYFRSTNND

A0A5D3DLT1 DUF4283 domain-containing protein1.4e-1233.74Show/hide
Query:  NFDSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDRPI----TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKI
        N++ D  S  + +EKI  K       EK K K + + E ++ I    ++RKVSF SP+N+T+ F    AP  TLK  SPM             Q  KKK+
Subjt:  NFDSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDRPI----TRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPRAFY------NQKEKKKI

Query:  YRIKSPPQEKAGEKAQQEIIVESPKDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKET------RTNEEDKKSIEADKGIPEEA-
        YR+KS   E+   +  ++   E     E  L VDLG +SPLSD   S P+      +  SPT S I+ +S  +         E+ KK    ++   EE  
Subjt:  YRIKSPPQEKAGEKAQQEIIVESPKDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKET------RTNEEDKKSIEADKGIPEEA-

Query:  FKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNNDTTS
        FK++L  WL++NNLRL    N          S F S  ND  S
Subjt:  FKKELRLWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNNDTTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCAGACGGATTCCGGTGAAAAAATTCTGGCACAGACGAAGAGCAAAATTGACGGTGACGCAAACCCCAACATTGGGTCAGCATCAACTTCAAATTTTGACAGTGACAG
AAGAAGTGAAAAGACGGTGACTGAGAAGATTATGGGGAAGAGAAAAATCCCAACAACAAACGAAAAAGGAAAACAAAAAATTTTGGTTGCTGAGGAAGGGGATCGTCCAA
TCACAAGGAGAAAAGTCTCCTTTCCATCTCCTCAAAATAAAACATATTATTTCAAGAGAGATCATGCTCCAGCTCACACATTGAAACAAAGAAGCCCAATGGGCCCACGG
GCCTTTTACAACCAGAAAGAAAAAAAGAAAATTTACAGAATTAAAAGTCCACCACAAGAGAAGGCAGGAGAGAAGGCCCAACAAGAAATCATCGTTGAAAGCCCAAAAGA
CCAAGAGATAGTCCTCACAGTTGATCTTGGACCACTTTCGCCGTTATCTGACATGGTGATCTCAAGCCCAGATGTTGTCATGGACACAGATACCCAACTATCCCCCACAG
CTTCATATATTCTGATGGAGAGTAAAGAAACAAGAACAAATGAAGAGGATAAAAAGTCAATTGAAGCAGATAAAGGCATCCCAGAAGAGGCTTTCAAAAAAGAGCTAAGA
TTATGGCTTCAAAAAAACAACCTCAGGCTGACAACCATGGAAAACCAGGAAGAACCAATTTATATCGTTAGGAGTTCATACTTCAGATCCACCAACAACGATACCACCTC
TTTAGAGAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
AACCAGACGGATTCCGGTGAAAAAATTCTGGCACAGACGAAGAGCAAAATTGACGGTGACGCAAACCCCAACATTGGGTCAGCATCAACTTCAAATTTTGACAGTGACAG
AAGAAGTGAAAAGACGGTGACTGAGAAGATTATGGGGAAGAGAAAAATCCCAACAACAAACGAAAAAGGAAAACAAAAAATTTTGGTTGCTGAGGAAGGGGATCGTCCAA
TCACAAGGAGAAAAGTCTCCTTTCCATCTCCTCAAAATAAAACATATTATTTCAAGAGAGATCATGCTCCAGCTCACACATTGAAACAAAGAAGCCCAATGGGCCCACGG
GCCTTTTACAACCAGAAAGAAAAAAAGAAAATTTACAGAATTAAAAGTCCACCACAAGAGAAGGCAGGAGAGAAGGCCCAACAAGAAATCATCGTTGAAAGCCCAAAAGA
CCAAGAGATAGTCCTCACAGTTGATCTTGGACCACTTTCGCCGTTATCTGACATGGTGATCTCAAGCCCAGATGTTGTCATGGACACAGATACCCAACTATCCCCCACAG
CTTCATATATTCTGATGGAGAGTAAAGAAACAAGAACAAATGAAGAGGATAAAAAGTCAATTGAAGCAGATAAAGGCATCCCAGAAGAGGCTTTCAAAAAAGAGCTAAGA
TTATGGCTTCAAAAAAACAACCTCAGGCTGACAACCATGGAAAACCAGGAAGAACCAATTTATATCGTTAGGAGTTCATACTTCAGATCCACCAACAACGATACCACCTC
TTTAGAGAATGTTTAG
Protein sequenceShow/hide protein sequence
NQTDSGEKILAQTKSKIDGDANPNIGSASTSNFDSDRRSEKTVTEKIMGKRKIPTTNEKGKQKILVAEEGDRPITRRKVSFPSPQNKTYYFKRDHAPAHTLKQRSPMGPR
AFYNQKEKKKIYRIKSPPQEKAGEKAQQEIIVESPKDQEIVLTVDLGPLSPLSDMVISSPDVVMDTDTQLSPTASYILMESKETRTNEEDKKSIEADKGIPEEAFKKELR
LWLQKNNLRLTTMENQEEPIYIVRSSYFRSTNNDTTSLENV