CuGenDBv2

Gene ID	Lsi10G005520
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Glycoside hydrolase, family 43
Genome location	chr10:8072654..8082806
RNA-Seq Expression	Lsi10G005520
Synteny	Lsi10G005520
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148026.1 uncharacterized protein LOC101203340 [Cucumis sativus]

1.2e-88

84.16

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG RR+  +GGDSSSGEEDGDA WR+AIDSVA+SSVFISSLTNG+PATS  T S+SD+  E NL AQ PKQYQIKAQKLLDNILETTLE+VEH N VPCD
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSKSSEGGIRLFKNAP+GVVFDHVDEL RPTKRPKILPGKEINEKSKK   QLRSVAVEGEDIITA+KR CEKSIARLEAKEAAVKAAAKREE+RVA++
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

XP_008457847.1 PREDICTED: uncharacterized protein LOC103497429 [Cucumis melo]

2.4e-89

84.68

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG RR+  +GGDSSSGEEDGDA WRAAIDSV VSSVFISSLTNG+PATS  T S  DDD ELNL AQ PK YQIKAQKLLDNILETTLE+VEH N VPC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSKSSEGGIRLFKNAP+GVVFDHVDEL RPTK+PKILPGKEINEKSKK   QLRSVAVEGEDIITAAKR CEKSIARLEAKEAA+KAAAKREEERVA++
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQH
        KKVRG KWLPSIAR MKLQ QH
Subjt:  KKVRGVKWLPSIARVMKLQFQH

XP_022946955.1 uncharacterized protein LOC111450982 [Cucurbita moschata]

9.1e-89

83.26

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG +RNGGYGGDSSSGEEDGDA WRAAIDSV  +SVF+SSLTNGLPATS TTASNSDDDSELNLG Q PKQYQIKAQK+L+NILETTLEVVEH   +PC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSK+SEGGIRLFKNAP+GVVFDH+DELQRPTK+PKILPGKEINEKSKK   +++SVAVEG+DII A  RA EKSIARLEAKEAA KAAAKREEERVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

XP_023007376.1 uncharacterized protein LOC111499889 [Cucurbita maxima]

9.1e-89

83.26

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG +RNGGYGGDSSSGEEDGDA WRAAIDSV  +SVF+SSLTNGLPATSTTTASNSDDDSELNLG Q PKQYQIKAQK+L+NILETTLEVVEH   +PC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSK+SEGGIRLFKNAP+GVVFDH+DELQRPTK+PKILPGKEINEKSKK   +++SVAVEG DII A  R  EKSIARLEAKEAA KAAAKREEERVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

XP_038900574.1 uncharacterized protein LOC120087760 [Benincasa hispida]

2.9e-95

88.29

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG RR+  YGGDSSSGEEDGDA WRAAIDSVAVSSVFISSLTNG+PATSTTT SNSDDD ELNLGAQ PKQYQIKAQKLLDNILETTLEVV H N VPCD
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        +DSKSSEGGIRLFKNAP+GVVFDHVDEL+RPTKRP ILPGKEINEKSKK   QL SVAVEGEDIITAAKRACEKSIARLEAKEAA+KAAAKREE RVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQH
        KKVRG KWLPSIAR MK QFQH
Subjt:  KKVRGVKWLPSIARVMKLQFQH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMM8 Uncharacterized protein

5.7e-89

84.16

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG RR+  +GGDSSSGEEDGDA WR+AIDSVA+SSVFISSLTNG+PATS  T S+SD+  E NL AQ PKQYQIKAQKLLDNILETTLE+VEH N VPCD
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSKSSEGGIRLFKNAP+GVVFDHVDEL RPTKRPKILPGKEINEKSKK   QLRSVAVEGEDIITA+KR CEKSIARLEAKEAAVKAAAKREE+RVA++
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

A0A1S3C6L4 uncharacterized protein LOC103497429

1.2e-89

84.68

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG RR+  +GGDSSSGEEDGDA WRAAIDSV VSSVFISSLTNG+PATS  T S  DDD ELNL AQ PK YQIKAQKLLDNILETTLE+VEH N VPC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSKSSEGGIRLFKNAP+GVVFDHVDEL RPTK+PKILPGKEINEKSKK   QLRSVAVEGEDIITAAKR CEKSIARLEAKEAA+KAAAKREEERVA++
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQH
        KKVRG KWLPSIAR MKLQ QH
Subjt:  KKVRGVKWLPSIARVMKLQFQH

A0A6J1D727 uncharacterized protein LOC111017872

2.5e-84

80.18

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        M  RRNGGYGGDSSSGEEDGDA WRAAIDSVA SSVFISSLTNG+P TSTT AS S+DDSELNL A  PKQYQIKA+K+L+NILETTLEVVEHP  VP  
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSK+  GGIRLFKNAP+GVVFDHVDEL+RPTKRPKI+PGKEINEKSKK   +L+SVAV+G DII +AKRACEKS+ RLEA+EAA KAAAKREEERVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQH
        KKVRG KWLPSIAR MKL  +H
Subjt:  KKVRGVKWLPSIARVMKLQFQH

A0A6J1G5G9 uncharacterized protein LOC111450982

4.4e-89

83.26

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG +RNGGYGGDSSSGEEDGDA WRAAIDSV  +SVF+SSLTNGLPATS TTASNSDDDSELNLG Q PKQYQIKAQK+L+NILETTLEVVEH   +PC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSK+SEGGIRLFKNAP+GVVFDH+DELQRPTK+PKILPGKEINEKSKK   +++SVAVEG+DII A  RA EKSIARLEAKEAA KAAAKREEERVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

A0A6J1L0C9 uncharacterized protein LOC111499889

4.4e-89

83.26

Show/hide

Query:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD
        MG +RNGGYGGDSSSGEEDGDA WRAAIDSV  +SVF+SSLTNGLPATSTTTASNSDDDSELNLG Q PKQYQIKAQK+L+NILETTLEVVEH   +PC 
Subjt:  MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCD

Query:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM
        DDSK+SEGGIRLFKNAP+GVVFDH+DELQRPTK+PKILPGKEINEKSKK   +++SVAVEG DII A  R  EKSIARLEAKEAA KAAAKREEERVAE+
Subjt:  DDSKSSEGGIRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKK---QLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEM

Query:  KKVRGVKWLPSIARVMKLQFQ
        KKVRG KWLPSIAR MKLQ Q
Subjt:  KKVRGVKWLPSIARVMKLQFQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49890.1 unknown protein

7.0e-39

46.7

Show/hide

Query:  GGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCDDDSKSSEGG
        GGDSSS  ED D  WRAAI+S+A ++V+ +S T   PA     A+ S +  +  L  +     QIK + LL+ ++E TL+ VE P  +P  +D   ++ G
Subjt:  GGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCDDDSKSSEGG

Query:  IRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKS---KKQLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEMKKVRGVKWL
        +RLFK    G+VFDHVDE++ P K+P + P K +   S   KK+++S+AV+G DI+TAA  A +K+ ARL+AKE A K  AK+EEER+AE+KKVRG KWL
Subjt:  IRLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKS---KKQLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEMKKVRGVKWL

Query:  PSIARVMKLQFQ
        PSI R MK + +
Subjt:  PSIARVMKLQFQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTGGTCGGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGAGAGGAAGACGGCGACGCTCTATGGAGAGCCGCCATCGATTCTGTTGCTGTCTCGTCTGTGTT
TATCTCGTCCTTAACTAATGGCCTTCCGGCTACTTCGACAACCACGGCTTCAAACTCGGATGATGATTCTGAGCTTAATCTCGGTGCTCAGGCGCCCAAGCAATATCAAA
TCAAGGCACAGAAGCTATTGGATAATATTTTGGAAACTACTCTAGAGGTGGTGGAACATCCCAATGTTGTTCCTTGTGATGATGATTCCAAATCCAGTGAAGGTGGAATT
CGTTTGTTTAAAAATGCTCCAATGGGGGTTGTGTTTGATCACGTGGATGAGCTTCAACGTCCCACAAAGAGACCTAAAATTCTTCCAGGGAAAGAAATCAACGAGAAATC
AAAGAAGCAGCTCCGATCCGTGGCCGTTGAAGGAGAAGACATAATAACTGCTGCAAAACGTGCCTGTGAGAAATCGATTGCTAGGCTTGAAGCTAAAGAAGCAGCAGTGA
AAGCAGCTGCCAAAAGAGAGGAAGAAAGGGTAGCAGAAATGAAAAAGGTAAGAGGAGTGAAATGGTTACCATCAATTGCTAGGGTAATGAAGTTACAATTTCAACATTGA

mRNA sequence

Show/hide mRNA sequence

TTCAAAGCAAAGCCCAATAATCCGATTTAGGCAACCAAATATTTGTTACGTTTACAGGCGCCAGAAACCGATGGGTGGTCGGAGAAACGGCGGCTATGGTGGCGACAGCA
GCAGCGGAGAGGAAGACGGCGACGCTCTATGGAGAGCCGCCATCGATTCTGTTGCTGTCTCGTCTGTGTTTATCTCGTCCTTAACTAATGGCCTTCCGGCTACTTCGACA
ACCACGGCTTCAAACTCGGATGATGATTCTGAGCTTAATCTCGGTGCTCAGGCGCCCAAGCAATATCAAATCAAGGCACAGAAGCTATTGGATAATATTTTGGAAACTAC
TCTAGAGGTGGTGGAACATCCCAATGTTGTTCCTTGTGATGATGATTCCAAATCCAGTGAAGGTGGAATTCGTTTGTTTAAAAATGCTCCAATGGGGGTTGTGTTTGATC
ACGTGGATGAGCTTCAACGTCCCACAAAGAGACCTAAAATTCTTCCAGGGAAAGAAATCAACGAGAAATCAAAGAAGCAGCTCCGATCCGTGGCCGTTGAAGGAGAAGAC
ATAATAACTGCTGCAAAACGTGCCTGTGAGAAATCGATTGCTAGGCTTGAAGCTAAAGAAGCAGCAGTGAAAGCAGCTGCCAAAAGAGAGGAAGAAAGGGTAGCAGAAAT
GAAAAAGGTAAGAGGAGTGAAATGGTTACCATCAATTGCTAGGGTAATGAAGTTACAATTTCAACATTGA

Protein sequence

Show/hide protein sequence

MGGRRNGGYGGDSSSGEEDGDALWRAAIDSVAVSSVFISSLTNGLPATSTTTASNSDDDSELNLGAQAPKQYQIKAQKLLDNILETTLEVVEHPNVVPCDDDSKSSEGGI
RLFKNAPMGVVFDHVDELQRPTKRPKILPGKEINEKSKKQLRSVAVEGEDIITAAKRACEKSIARLEAKEAAVKAAAKREEERVAEMKKVRGVKWLPSIARVMKLQFQH

Lsi10G005520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome