; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein Musashi homolog 1
Genome locationchr10:8249973..8253212
RNA-Seq ExpressionLsi10G005630
SyntenyLsi10G005630
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571306.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10877.17Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQ-GQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEA
        DSVE+LMA+THELGGSTV        DDDFRPIGKMPQ G GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEA
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQ-GQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEA

Query:  SADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWI
        SADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                            
Subjt:  SADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWI

Query:  LQVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
         QVAIDSATPLDD AGAGAAGA GSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Subjt:  LQVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

XP_008457826.1 PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo]1.6e-10876.81Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGA+GA G+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

XP_011649346.1 RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus]4.3e-10977.17Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGS V        DDDFRPIGKMP  QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGA+GA G+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

XP_031737419.1 heterogeneous nuclear ribonucleoprotein A/B isoform X1 [Cucumis sativus]4.3e-10977.17Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGS V        DDDFRPIGKMP  QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGA+GA G+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

XP_038877270.1 RNA-binding protein Musashi homolog 1 [Benincasa hispida]1.9e-10977.54Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE+RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGAAGA G+FMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

TrEMBL top hitse value%identityAlignment
A0A0A0LMN9 Uncharacterized protein2.1e-10977.17Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGS V        DDDFRPIGKMP  QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGA+GA G+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

A0A1S3C728 RNA-binding protein Musashi homolog 18.0e-10976.81Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        DSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD  AGAGA+GA G+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Subjt:  QVAIDSATPLDD--AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

A0A6J1EWL0 heterogeneous nuclear ribonucleoprotein D0-like3.9e-10876.26Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQ---GQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQ
        DSVE+LMA+THELGGSTV        DDDFRPIGKMPQ   G GGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQ
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQ---GQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQ

Query:  EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHR
        EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ                                          
Subjt:  EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHR

Query:  WILQVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
           QVAIDSATPLDD AGAGAAGA GSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Subjt:  WILQVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

A0A6J1I6V1 heterogeneous nuclear ribonucleoprotein 1-like isoform X25.2e-10876.73Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        +SVE+LMA+THELGGSTV        DDDFRPIGKMPQG GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD AGAGAAGA GSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Subjt:  QVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

A0A6J1I7Z8 heterogeneous nuclear ribonucleoprotein D-like-B isoform X15.2e-10876.73Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS
        +SVE+LMA+THELGGSTV        DDDFRPIGKMPQG GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEAS
Subjt:  DSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS

Query:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL
        ADDLRQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ                                             
Subjt:  ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWIL

Query:  QVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
        QVAIDSATPLDD AGAGAAGA GSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Subjt:  QVAIDSATPLDD-AGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

SwissProt top hitse value%identityAlignment
Q920Q6 RNA-binding protein Musashi homolog 24.0e-0945.16Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSH
        K+F+G L  + S D LR YF +FG I +  V +DP     RGFGFVTFA+    D+V  + H
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSH

Q96DH6 RNA-binding protein Musashi homolog 24.0e-0945.16Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSH
        K+F+G L  + S D LR YF +FG I +  V +DP     RGFGFVTFA+    D+V  + H
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSH

Q99020 Heterogeneous nuclear ribonucleoprotein A/B8.2e-1044.29Show/hide
Query:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF-AEDGVADRVSRRSHEICGQQ
        KKIFVG L  EA+ + +R+YFG+FG I  + +P DPK +  RGF F+TF  ED V   + ++ H + G +
Subjt:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF-AEDGVADRVSRRSHEICGQQ

Q99383 Nuclear polyadenylated RNA-binding protein 44.0e-0937.31Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ
        K+F+G L  + + D+LR+YFG++G + D+ + KDP     RGFGF++F +    D V +  H + G+
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ

Q9VVE5 RNA-binding protein Musashi homolog Rbp66.2e-1043.48Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV-SRRSHEICGQQ
        K+F+G L  + S + LR YFGR+G I +  V KDP     RGFGFVTF++    D+V ++ +HE+ G++
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV-SRRSHEICGQQ

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-1039.19Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRT
        K+FVG +  E +A+    YFG+FG ++D  +  D      RGFGFVTFA+  VA++V    H I  ++    RT
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRT

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-7655.63Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG----QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKI
        DSVE+LM DTH+LGG+TV        +DD      P+ +M +      GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KI
Subjt:  DSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG----QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKI

Query:  FVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFY
        FVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHEICGQ                                   
Subjt:  FVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFY

Query:  FNQESHRWILQVAIDSATPLDDAGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
                  +VAIDSATPLD+AG  A  +  S + +S  E FGGY GPMR +GRMYG +  DDWGYG+   RPSR D RYRPY
Subjt:  FNQESHRWILQVAIDSATPLDDAGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-7655.63Show/hide
Query:  DSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG----QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKI
        DSVE+LM DTH+LGG+TV        +DD      P+ +M +      GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KI
Subjt:  DSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG----QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKI

Query:  FVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFY
        FVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHEICGQ                                   
Subjt:  FVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFY

Query:  FNQESHRWILQVAIDSATPLDDAGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
                  +VAIDSATPLD+AG  A  +  S + +S  E FGGY GPMR +GRMYG +  DDWGYG+   RPSR D RYRPY
Subjt:  FNQESHRWILQVAIDSATPLDDAGAGAAGAGGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-1243.24Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRT
        KIFVG L +E ++ +  ++FG++G I D  + KD K    RGFGFVT+A+  V D+V + +H I G+Q    RT
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRT

AT5G47620.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-1044.78Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ
        K+F+G +  E S D LR YF  FG +L+  + KD      RGFGFV FA+  VA+RV    H I G+
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGGGGTTCTACTGTGGATGATGATTTCAGGCCCATTGGGAAAATGCCGCAGGGTCAGGGTGGTGGTGG
GGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCTGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCTCAGTTTATGGGAGAA
GGGAACTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTCGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGTCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTC
TATGTTCCGAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCACGAGATTTGTGG
ACAACAGGCATTTTCAGTTCGAACTTTTTGGGTGTGGATCCCTCTCTGTAATTTTCTTTTTGTTCCTCTATTTGGCTCTCTCTGTGGTGGGTTGGTCGATTCTTTTTACT
TCAATCAAGAATCTCACCGTTGGATTCTGCAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCAGCTGGAGCAGGTGGAAGTTTTATGATGAAT
AGCGCTGCAGAATCTTTCGGCGGCTATGTTGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATTGGGGTTATGGTATTGGTGGTGGAAGACC
ATCTAGAGCAGACTGGAGGTATCGGCCATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGGGGTTCTACTGTGGATGATGATTTCAGGCCCATTGGGAAAATGCCGCAGGGTCAGGGTGGTGGTGG
GGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCTGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCTCAGTTTATGGGAGAA
GGGAACTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTCGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGTCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTC
TATGTTCCGAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCACGAGATTTGTGG
ACAACAGGCATTTTCAGTTCGAACTTTTTGGGTGTGGATCCCTCTCTGTAATTTTCTTTTTGTTCCTCTATTTGGCTCTCTCTGTGGTGGGTTGGTCGATTCTTTTTACT
TCAATCAAGAATCTCACCGTTGGATTCTGCAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCAGCTGGAGCAGGTGGAAGTTTTATGATGAAT
AGCGCTGCAGAATCTTTCGGCGGCTATGTTGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATTGGGGTTATGGTATTGGTGGTGGAAGACC
ATCTAGAGCAGACTGGAGGTATCGGCCATACTAAAGAGAGAGAGACCTTCAGCCTTCTTGAAGTAGTGATTGGGTTGATAAATCAACAGAAATGAATTGCCCTATTTATG
AGGAAGATATTCGGAGTTTTGGCCTTTGTAGAGTCAATATCTTTGGATGTATGTTTATTGCATTCTTTCCTTTGTTTTTTCTTTTTCCCTTAACTGAAACATGTTGGGTT
CGGGGTCGGGGTTTGAAGGGTAGGTTGGTTGTATGTACCCTTTGGTTAGAAGTTATTAGTTAGTTGTATTCTTCTCTAACTCTGCTTTAAGAAAATCTATTTTACAAATA
TTTTTTTAGGATAGTTTGGTTTTCCACGGACAACTTATTATATGCCAGAGGCATCCAATGTCACAGAATGGTGACTAGTGATCCCTTTCCCTTCTTGATCTGCTCCAATG
ACACACTTTACATTCACACCCA
Protein sequenceShow/hide protein sequence
MDSVENLMADTHELGGSTVDDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDV
YVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQAFSVRTFWVWIPLCNFLFVPLFGSLCGGLVDSFYFNQESHRWILQVAIDSATPLDDAGAGAAGAGGSFMMN
SAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY