CuGenDBv2

Gene ID	Lsi10G005750
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein DA1-related 1-like isoform X1
Genome location	chr10:8388587..8389892
RNA-Seq Expression	Lsi10G005750
Synteny	Lsi10G005750
Gene Ontology terms	GO:0043130 - ubiquitin binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR003903 - Ubiquitin interacting motif

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571426.1 Protein DA1-related 1, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-63

70.48

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL E+E+EEIDYAIALSL  ED KGKA                                  + EEEA SDEDEHSTKAESEDDEQS K +S+DDDQITK
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        S LEEDER  K +MEED+R+AKAQMEEDERLAKAQMEEDERAAKAQLEEDE++ASTLVEDDEKVST+Q EEDEQLARALQESLN+EPPPPR+DSGNIFN 
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

KAG7011191.1 Protein DA1-related 1 [Cucurbita argyrosperma subsp. argyrosperma]

9.2e-63

70.48

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL E+E+EEIDYAIALSL  ED KGKA                                  + EEEA SDEDEHSTKAESEDDEQS K +S+DDDQITK
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        S LEEDER  K +MEED+R+AKAQMEEDERLAKAQMEEDERAAKAQLEEDE++ASTLVEDDEKVST+Q EEDEQLARALQESLN+EPPPPR+DSGNIFN 
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

XP_022928051.1 protein DA1-related 1 [Cucurbita moschata]

9.2e-63

70.48

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL E+E+EEIDYAIALSL  ED KGKA                                  + EEEA SDEDEHSTKAESEDDEQS K +S+DDDQITK
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        S LEEDER  K +MEED+R+AKAQMEEDERLAKAQMEEDERAAKAQLEEDE++ASTLVEDDEKVST+Q EEDEQLARALQESLN+EPPPPR+DSGNIFN 
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

XP_023512539.1 protein DA1-related 1 [Cucurbita pepo subsp. pepo]

2.7e-62

70.48

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL E+E+EEIDYAIALSL  ED KGKA+I                                  EEEA SDEDEHSTKAESEDDEQS K +S+DDDQITK
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        S LEEDER  K +MEED R+AKAQMEEDERLAKAQMEEDERAAKAQLEEDE++ASTLVEDDEKVST+Q EEDEQLARALQESLN+EPPPPR+D+GNIFN 
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

XP_038901284.1 LOW QUALITY PROTEIN: protein DA1-related 1-like [Benincasa hispida]

3.2e-71

78.57

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL EYEQEEIDYAIALSLSVEDQKGKAVI                                  +EEAQSDEDEHSTKAESEDDE+SIKSQSEDDDQIT 
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        SHLEEDER +K RMEE+ERV KAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQ EEDEQLARALQESLNIEPPPPRYDSGNIFNP
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C6I4 protein DA1-related 1-like isoform X2

3.8e-62

67.24

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        +EL EYEQEEIDYAIALSLSVEDQK KAVI                                  EEEA SDEDEHSTKAESEDDE+SIK  SEDDDQI+K
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA
        SHL                      EEDER  K +MEEDER+AKAQMEEDERLAKAQMEE+E+ AKAQLEEDERIASTLVED EKVSTFQ EEDEQLARA
Subjt:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA

Query:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR
        LQESLNIEPPPPR+DSGNIFNPYPFF+PSGYR
Subjt:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR

A0A1S4E1R4 protein DA1-related 1-like isoform X1

3.8e-62

67.24

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        +EL EYEQEEIDYAIALSLSVEDQK KAVI                                  EEEA SDEDEHSTKAESEDDE+SIK  SEDDDQI+K
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA
        SHL                      EEDER  K +MEEDER+AKAQMEEDERLAKAQMEE+E+ AKAQLEEDERIASTLVED EKVSTFQ EEDEQLARA
Subjt:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA

Query:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR
        LQESLNIEPPPPR+DSGNIFNPYPFF+PSGYR
Subjt:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR

A0A5A7TRX5 Protein DA1-related 1-like isoform X1

3.8e-62

67.24

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        +EL EYEQEEIDYAIALSLSVEDQK KAVI                                  EEEA SDEDEHSTKAESEDDE+SIK  SEDDDQI+K
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA
        SHL                      EEDER  K +MEEDER+AKAQMEEDERLAKAQMEE+E+ AKAQLEEDERIASTLVED EKVSTFQ EEDEQLARA
Subjt:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA

Query:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR
        LQESLNIEPPPPR+DSGNIFNPYPFF+PSGYR
Subjt:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR

A0A5D3BMU9 Protein DA1-related 1-like isoform X1

3.8e-62

67.24

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        +EL EYEQEEIDYAIALSLSVEDQK KAVI                                  EEEA SDEDEHSTKAESEDDE+SIK  SEDDDQI+K
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA
        SHL                      EEDER  K +MEEDER+AKAQMEEDERLAKAQMEE+E+ AKAQLEEDERIASTLVED EKVSTFQ EEDEQLARA
Subjt:  SHL----------------------EEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARA

Query:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR
        LQESLNIEPPPPR+DSGNIFNPYPFF+PSGYR
Subjt:  LQESLNIEPPPPRYDSGNIFNPYPFFFPSGYR

A0A6J1EIU3 protein DA1-related 1

4.5e-63

70.48

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Query:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK
        DEL E+E+EEIDYAIALSL  ED KGKA                                  + EEEA SDEDEHSTKAESEDDEQS K +S+DDDQITK
Subjt:  DELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITK

Query:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP
        S LEEDER  K +MEED+R+AKAQMEEDERLAKAQMEEDERAAKAQLEEDE++ASTLVEDDEKVST+Q EEDEQLARALQESLN+EPPPPR+DSGNIFN 
Subjt:  SHLEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNP

Query:  YPFFFPSGYR
        YPFF+PSGYR
Subjt:  YPFFFPSGYR

SwissProt top hits

e value

%identity

Alignment

Q8W4F0 Protein DA1-related 1

1.8e-13

36.49

Show/hide

Query:  PDYHDELAEYEQEEIDYAIALSLS------VEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKS
        P Y  E +++++EEI+ AIALSLS       +D KGK +I                                  E +++++ED+       +DDE     
Subjt:  PDYHDELAEYEQEEIDYAIALSLS------VEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKS

Query:  QSEDDDQITKSHLEEDERFKKVRMEEDERVAKAQMEEDE-RLAKAQMEEDER-AAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPP
          ++D++  ++ LE  E       EE+ RVA+AQ+EE+E R A+AQ+EE E+  AKA+LEE+E           + S  Q EEDE LA+ALQES+N+   
Subjt:  QSEDDDQITKSHLEEDERFKKVRMEEDERVAKAQMEEDE-RLAKAQMEEDER-AAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPP

Query:  PPRYDSGNIFNPYPFFFPSGYR
        PPRYD GNI  PYPF  PS +R
Subjt:  PPRYDSGNIFNPYPFFFPSGYR

Arabidopsis top hits

e value

%identity

Alignment

AT4G36860.1 LIM domain-containing protein

1.3e-14

36.49

Show/hide

Query:  PDYHDELAEYEQEEIDYAIALSLS------VEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKS
        P Y  E +++++EEI+ AIALSLS       +D KGK +I                                  E +++++ED+       +DDE     
Subjt:  PDYHDELAEYEQEEIDYAIALSLS------VEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKS

Query:  QSEDDDQITKSHLEEDERFKKVRMEEDERVAKAQMEEDE-RLAKAQMEEDER-AAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPP
          ++D++  ++ LE  E       EE+ RVA+AQ+EE+E R A+AQ+EE E+  AKA+LEE+E           + S  Q EEDE LA+ALQES+N+   
Subjt:  QSEDDDQITKSHLEEDERFKKVRMEEDERVAKAQMEEDE-RLAKAQMEEDER-AAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPP

Query:  PPRYDSGNIFNPYPFFFPSGYR
        PPRYD GNI  PYPF  PS +R
Subjt:  PPRYDSGNIFNPYPFFFPSGYR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTATGGTGCCAGACTATCATGATGAATTGGCAGAATATGAACAAGAGGAAATCGATTATGCAATTGCACTTTCACTTTCAGTAGAAGATCAAAAAGGGAAAGCAGT
GATAGGTATTGTTGATAATACCGTCTTGTCGGCAAGGAGAATTATTTTAGATGTTGAAATGATGCCCGAGTTTAGTTTTTTTGTTTTTCTTGACTTATCAATTGCAGAGG
AAGAAGCTCAAAGTGATGAAGATGAACACAGTACCAAAGCTGAATCAGAGGATGATGAACAAAGTATCAAATCCCAGTCAGAGGATGATGATCAAATTACTAAATCTCAT
TTGGAGGAAGATGAGCGATTTAAGAAAGTTCGAATGGAGGAAGATGAGCGAGTTGCAAAAGCTCAAATGGAGGAAGATGAGCGACTAGCTAAAGCCCAAATGGAGGAAGA
TGAGAGAGCTGCCAAAGCTCAATTGGAGGAAGATGAGCGGATTGCTAGCACCCTAGTGGAGGATGATGAGAAGGTTTCCACATTTCAAACTGAAGAAGATGAACAGTTAG
CTAGAGCTCTCCAAGAAAGTCTAAACATAGAGCCACCACCTCCTAGATATGATAGTGGAAATATTTTCAATCCTTATCCTTTCTTCTTTCCATCAGGATACAGGTACGTA
TGGTCAACATGCATAATTTTTAGCATCATGAAAGGGCAAGTGGCCCAATGA

mRNA sequence

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Protein sequence

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MAMVPDYHDELAEYEQEEIDYAIALSLSVEDQKGKAVIGIVDNTVLSARRIILDVEMMPEFSFFVFLDLSIAEEEAQSDEDEHSTKAESEDDEQSIKSQSEDDDQITKSH
LEEDERFKKVRMEEDERVAKAQMEEDERLAKAQMEEDERAAKAQLEEDERIASTLVEDDEKVSTFQTEEDEQLARALQESLNIEPPPPRYDSGNIFNPYPFFFPSGYRYV
WSTCIIFSIMKGQVAQ

Lsi10G005750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome