; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein DA1-related 1
Genome locationchr10:8390452..8392961
RNA-Seq ExpressionLsi10G005760
SyntenyLsi10G005760
Gene Ontology termsGO:0043130 - ubiquitin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99478.1 protein DA1-related 1-like isoform X1 [Cucumis melo var. makuwa]1.9e-4580.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

XP_008457805.1 PREDICTED: protein DA1-related 1-like isoform X1 [Cucumis melo]1.9e-4580.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

XP_008457811.1 PREDICTED: protein DA1-related 1-like isoform X2 [Cucumis melo]1.9e-4580.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

XP_008457813.1 PREDICTED: protein DA1-related 1-like isoform X3 [Cucumis melo]1.9e-4580.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

XP_038901284.1 LOW QUALITY PROTEIN: protein DA1-related 1-like [Benincasa hispida]2.4e-4580.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCM A                    FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

TrEMBL top hitse value%identityAlignment
A0A1S3C6D1 protein DA1-related 1-like isoform X39.0e-4680.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

A0A1S3C6I4 protein DA1-related 1-like isoform X29.0e-4680.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

A0A1S4E1R4 protein DA1-related 1-like isoform X19.0e-4680.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

A0A5A7TRX5 Protein DA1-related 1-like isoform X19.0e-4680.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

A0A5D3BMU9 Protein DA1-related 1-like isoform X19.0e-4680.56Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        VCAGCQTEIGHGRFLSCMGA                    FSMS NRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

SwissProt top hitse value%identityAlignment
P0C7Q8 Protein DA12.1e-3659.26Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +CAGC  EIGHGRFL+C+ +                    FS SGN P+HK+CY+E++HP+CDVC +FIPTN +GLIEYR HPFW Q+YCPSHE D TPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

Q0WSN2 Protein DA1-related 23.2e-3253.7Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +C GC ++IG G +L CMG                     FS+SG +PYHK C+KE  HP+C+VC +FIPTN +GLIEYR HPFW+Q+YCPSHE D T R
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCER+E
Subjt:  CCSCERME

Q8W4F0 Protein DA1-related 16.9e-4369.44Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +C GCQ EIGHGRFLSCMG                     FSMSGNRPYHK CYKEQHHP+CDVC NFIPTN +GLIEYR HPFW Q+YCPSHE+DGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

Q9FKN7 Protein DA1-related 43.1e-1961.67Show/hide
Query:  YHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME
        YHK CYKE  HP C VC   IP  + GL +Y +HPFW + YCPSH+ DGTP+CCSCER+E
Subjt:  YHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME

Q9LVR6 Protein DA1-related 37.2e-1650.82Show/hide
Query:  YHKSCYKEQHHPR-CDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME
        +H  CYKE +  R C VC+  IP N+ G+ ++ +HPFW ++YCP H++DGT +CCSCER+E
Subjt:  YHKSCYKEQHHPR-CDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME

Arabidopsis top hitse value%identityAlignment
AT1G19270.1 DA11.5e-3759.26Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +CAGC  EIGHGRFL+C+ +                    FS SGN P+HK+CY+E++HP+CDVC +FIPTN +GLIEYR HPFW Q+YCPSHE D TPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

AT2G39830.1 DA1-related protein 22.3e-3353.7Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +C GC ++IG G +L CMG                     FS+SG +PYHK C+KE  HP+C+VC +FIPTN +GLIEYR HPFW+Q+YCPSHE D T R
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCER+E
Subjt:  CCSCERME

AT4G36860.1 LIM domain-containing protein4.9e-4469.44Show/hide
Query:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR
        +C GCQ EIGHGRFLSCMG                     FSMSGNRPYHK CYKEQHHP+CDVC NFIPTN +GLIEYR HPFW Q+YCPSHE+DGTPR
Subjt:  VCAGCQTEIGHGRFLSCMGA--------------------FSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPR

Query:  CCSCERME
        CCSCERME
Subjt:  CCSCERME

AT5G17890.1 DA1-related protein 42.2e-2061.67Show/hide
Query:  YHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME
        YHK CYKE  HP C VC   IP  + GL +Y +HPFW + YCPSH+ DGTP+CCSCER+E
Subjt:  YHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME

AT5G66640.1 DA1-related protein 35.1e-1750.82Show/hide
Query:  YHKSCYKEQHHPR-CDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME
        +H  CYKE +  R C VC+  IP N+ G+ ++ +HPFW ++YCP H++DGT +CCSCER+E
Subjt:  YHKSCYKEQHHPR-CDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCGTGTGTCTCCACTTACAGTATTATGATGGTCTGTGCTGGTTGCCAAACTGAGATCGGTCACGGGCGGTTTCTAAGTTGCATGGGAGCTTTCTCTATGTCTGG
GAACCGACCTTATCACAAATCCTGCTATAAGGAGCAACATCACCCTAGATGTGACGTTTGCCGAAACTTTATTCCTACTAATTCTTCTGGTCTTATAGAGTATAGAAAGC
ATCCTTTCTGGTCACAGCAATATTGTCCTTCACATGAAAAAGATGGAACTCCGAGATGTTGTAGCTGTGAAAGAATGGAGGTACTTTTCGCATATCGTGTTTACCTCCTC
CCCCTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCGTGTGTCTCCACTTACAGTATTATGATGGTCTGTGCTGGTTGCCAAACTGAGATCGGTCACGGGCGGTTTCTAAGTTGCATGGGAGCTTTCTCTATGTCTGG
GAACCGACCTTATCACAAATCCTGCTATAAGGAGCAACATCACCCTAGATGTGACGTTTGCCGAAACTTTATTCCTACTAATTCTTCTGGTCTTATAGAGTATAGAAAGC
ATCCTTTCTGGTCACAGCAATATTGTCCTTCACATGAAAAAGATGGAACTCCGAGATGTTGTAGCTGTGAAAGAATGGAGGTACTTTTCGCATATCGTGTTTACCTCCTC
CCCCTCTACTGA
Protein sequenceShow/hide protein sequence
MDSCVSTYSIMMVCAGCQTEIGHGRFLSCMGAFSMSGNRPYHKSCYKEQHHPRCDVCRNFIPTNSSGLIEYRKHPFWSQQYCPSHEKDGTPRCCSCERMEVLFAYRVYLL
PLY