; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:8548708..8549168
RNA-Seq ExpressionLsi10G005870
SyntenyLsi10G005870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651933.1 hypothetical protein Csa_006731 [Cucumis sativus]2.5e-3068.42Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG
        + V ITSSQIKFV  +DH +   TT++G CIIGGIEEG+EI+CGISLYPMEFY AFTSKRVW F + D NGL+L+ PMG+YTHISSFFP D   G
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG

XP_008457793.2 PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo]1.4e-2868.13Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD
        + V ITSS+IKFV  IDH +   TT++G+CIIGGIEEG EI+CGISLYPM+FY AFTSKRVW F + D NGL+L+ PMG+YTHISSFFP +
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD

XP_022928046.1 uncharacterized protein LOC111434948 [Cucurbita moschata]4.3e-2257.61Show/hide
Query:  ITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEGN
        IT+SQIKF+VE    +V+LTT+  +CIIGG   GDE E  + L P EF+  FTS+R+WLFK+YDP G+ L+ PMGLY HISS+FP+D Y  N
Subjt:  ITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEGN

XP_031737287.1 uncharacterized protein LOC116402216 [Cucumis sativus]2.5e-3068.42Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG
        + V ITSSQIKFV  +DH +   TT++G CIIGGIEEG+EI+CGISLYPMEFY AFTSKRVW F + D NGL+L+ PMG+YTHISSFFP D   G
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG

XP_031737417.1 uncharacterized protein LOC116402255 [Cucumis sativus]1.9e-2564.84Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD
        + + I SSQI FVV+ D  +   T ++G+CIIGGIEEGDEI CGIS YPMEFY  FTSKRVW F + D NGL+L+ PMG+YTHISSFFP D
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD

TrEMBL top hitse value%identityAlignment
A0A0A0LJU4 Uncharacterized protein1.2e-3068.42Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG
        + V ITSSQIKFV  +DH +   TT++G CIIGGIEEG+EI+CGISLYPMEFY AFTSKRVW F + D NGL+L+ PMG+YTHISSFFP D   G
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG

A0A0A0LMQ7 Uncharacterized protein9.0e-2664.84Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD
        + + I SSQI FVV+ D  +   T ++G+CIIGGIEEGDEI CGIS YPMEFY  FTSKRVW F + D NGL+L+ PMG+YTHISSFFP D
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD

A0A0A0LQ10 Uncharacterized protein1.8e-2675.32Show/hide
Query:  KVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVW-LFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG
        +VILTT++G+CIIGG EEGDEI+CGISLYPMEFY AFTSK VW LF +YDPNG++L+ PMGLYTHISSF P D Y G
Subjt:  KVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVW-LFKAYDPNGLILVGPMGLYTHISSFFPDDCYEG

A0A1S3C6G9 uncharacterized protein LOC1034973976.7e-2968.13Show/hide
Query:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD
        + V ITSS+IKFV  IDH +   TT++G+CIIGGIEEG EI+CGISLYPM+FY AFTSKRVW F + D NGL+L+ PMG+YTHISSFFP +
Subjt:  ISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDD

A0A6J1EJ67 uncharacterized protein LOC1114349482.1e-2257.61Show/hide
Query:  ITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEGN
        IT+SQIKF+VE    +V+LTT+  +CIIGG   GDE E  + L P EF+  FTS+R+WLFK+YDP G+ L+ PMGLY HISS+FP+D Y  N
Subjt:  ITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATTTCTGTTATTATTACGAGTTCACAAATCAAATTTGTGGTTGAAATTGATCATACGAAAGTTATTCTCACTACCGAGGATGGAGATTGCATAATTGGAGGTAT
TGAAGAAGGAGATGAAATTGAATGTGGAATTAGTCTTTATCCAATGGAATTTTACCTTGCATTCACATCGAAGAGAGTATGGTTATTCAAGGCATATGATCCCAATGGTT
TGATATTGGTTGGTCCTATGGGATTGTATACTCATATTTCTTCATTTTTTCCTGATGATTGCTATGAGGGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATTTCTGTTATTATTACGAGTTCACAAATCAAATTTGTGGTTGAAATTGATCATACGAAAGTTATTCTCACTACCGAGGATGGAGATTGCATAATTGGAGGTAT
TGAAGAAGGAGATGAAATTGAATGTGGAATTAGTCTTTATCCAATGGAATTTTACCTTGCATTCACATCGAAGAGAGTATGGTTATTCAAGGCATATGATCCCAATGGTT
TGATATTGGTTGGTCCTATGGGATTGTATACTCATATTTCTTCATTTTTTCCTGATGATTGCTATGAGGGGAATTGA
Protein sequenceShow/hide protein sequence
MVISVIITSSQIKFVVEIDHTKVILTTEDGDCIIGGIEEGDEIECGISLYPMEFYLAFTSKRVWLFKAYDPNGLILVGPMGLYTHISSFFPDDCYEGN